Gene : AT3G59300 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13343//PTHR13343:SF18 - CREG1 PROTEIN // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  4987
Name:  ? AT3G59300 Secondary Identifier:  ? PAC:19665081
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59300 0.5kb upstream 0.5kb upstream 4752 true Chr3: 21917955-21922706 Arabidopsis thaliana
AT3G59300 0.5kb upstream 0.5kb upstream 500 false Chr3: 21917955-21918454 Arabidopsis thaliana
AT3G59300 0.5kb downstream 0.5kb downstream 4752 true Chr3: 21918455-21923206 Arabidopsis thaliana
AT3G59300 0.5kb downstream 0.5kb downstream 500 false Chr3: 21922707-21923206 Arabidopsis thaliana
AT3G59300 1.0kb upstream 1.0kb upstream 5252 true Chr3: 21917455-21922706 Arabidopsis thaliana
AT3G59300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21917455-21918454 Arabidopsis thaliana
AT3G59300 1.0kb downstream 1.0kb downstream 5252 true Chr3: 21918455-21923706 Arabidopsis thaliana
AT3G59300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21922707-21923706 Arabidopsis thaliana
AT3G59300 2.0kb upstream 2.0kb upstream 6252 true Chr3: 21916455-21922706 Arabidopsis thaliana
AT3G59300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21916455-21918454 Arabidopsis thaliana
AT3G59300 2.0kb downstream 2.0kb downstream 6252 true Chr3: 21918455-21924706 Arabidopsis thaliana
AT3G59300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21922707-21924706 Arabidopsis thaliana
AT3G59300 5.0kb upstream 5.0kb upstream 9252 true Chr3: 21913455-21922706 Arabidopsis thaliana
AT3G59300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21913455-21918454 Arabidopsis thaliana
AT3G59300 5.0kb downstream 5.0kb downstream 9252 true Chr3: 21918455-21927706 Arabidopsis thaliana
AT3G59300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21922707-21927706 Arabidopsis thaliana
AT3G59300 10.0kb upstream 10.0kb upstream 14252 true Chr3: 21908455-21922706 Arabidopsis thaliana
AT3G59300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21908455-21918454 Arabidopsis thaliana
AT3G59300 10.0kb downstream 10.0kb downstream 14252 true Chr3: 21918455-21932706 Arabidopsis thaliana
AT3G59300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21922707-21932706 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362046 5261 Brassicaceae View MSA
123832420 5264 Brassicales-Malvales View MSA
124321797 5266 SBM View MSA
124247203 5268 Malvidae View MSA
124068606 5270 Rosid View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.972        
cufflinks 8.783        
cufflinks 15.455       High
cufflinks 9.57        
cufflinks 13.577        
cufflinks 7.631       Low

0 Strain