Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6441 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G59050 0.5kb upstream | 0.5kb | upstream | 3314 | true | Chr3: 21824696-21828009 | Arabidopsis thaliana |
AT3G59050 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 21827510-21828009 | Arabidopsis thaliana |
AT3G59050 0.5kb downstream | 0.5kb | downstream | 3314 | true | Chr3: 21824196-21827509 | Arabidopsis thaliana |
AT3G59050 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 21824196-21824695 | Arabidopsis thaliana |
AT3G59050 1.0kb upstream | 1.0kb | upstream | 3814 | true | Chr3: 21824696-21828509 | Arabidopsis thaliana |
AT3G59050 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 21827510-21828509 | Arabidopsis thaliana |
AT3G59050 1.0kb downstream | 1.0kb | downstream | 3814 | true | Chr3: 21823696-21827509 | Arabidopsis thaliana |
AT3G59050 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 21823696-21824695 | Arabidopsis thaliana |
AT3G59050 2.0kb upstream | 2.0kb | upstream | 4814 | true | Chr3: 21824696-21829509 | Arabidopsis thaliana |
AT3G59050 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 21827510-21829509 | Arabidopsis thaliana |
AT3G59050 2.0kb downstream | 2.0kb | downstream | 4814 | true | Chr3: 21822696-21827509 | Arabidopsis thaliana |
AT3G59050 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 21822696-21824695 | Arabidopsis thaliana |
AT3G59050 5.0kb upstream | 5.0kb | upstream | 7814 | true | Chr3: 21824696-21832509 | Arabidopsis thaliana |
AT3G59050 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 21827510-21832509 | Arabidopsis thaliana |
AT3G59050 5.0kb downstream | 5.0kb | downstream | 7814 | true | Chr3: 21819696-21827509 | Arabidopsis thaliana |
AT3G59050 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 21819696-21824695 | Arabidopsis thaliana |
AT3G59050 10.0kb upstream | 10.0kb | upstream | 12814 | true | Chr3: 21824696-21837509 | Arabidopsis thaliana |
AT3G59050 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 21827510-21837509 | Arabidopsis thaliana |
AT3G59050 10.0kb downstream | 10.0kb | downstream | 12814 | true | Chr3: 21814696-21827509 | Arabidopsis thaliana |
AT3G59050 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 21814696-21824695 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122369311 | 5261 | Brassicaceae | View MSA |
123799754 | 5264 | Brassicales-Malvales | View MSA |
124297243 | 5266 | SBM | View MSA |
124244923 | 5268 | Malvidae | View MSA |
124065173 | 5270 | Rosid | View MSA |
123745734 | 5271 | Pentapetalae | View MSA |
122788869 | 5272 | Eudicot | View MSA |
122044597 | 5273 | Angiosperm | View MSA |
121345919 | 5274 | Embryophyte | View MSA |
123428250 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |