Gene : PAO3 A. thaliana TAIR10

Primary Identifier:  ? AT3G59050 Defline:  (1 of 3) K17839 - polyamine oxidase (PAO4, PAO3, PAO2)
Genomic Order:  4962 Name:  ? AT3G59050
Secondary Identifier:  ? PAC:19664763

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6441 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59050 0.5kb upstream 0.5kb upstream 3314 true Chr3: 21824696-21828009 Arabidopsis thaliana
AT3G59050 0.5kb upstream 0.5kb upstream 500 false Chr3: 21827510-21828009 Arabidopsis thaliana
AT3G59050 0.5kb downstream 0.5kb downstream 3314 true Chr3: 21824196-21827509 Arabidopsis thaliana
AT3G59050 0.5kb downstream 0.5kb downstream 500 false Chr3: 21824196-21824695 Arabidopsis thaliana
AT3G59050 1.0kb upstream 1.0kb upstream 3814 true Chr3: 21824696-21828509 Arabidopsis thaliana
AT3G59050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21827510-21828509 Arabidopsis thaliana
AT3G59050 1.0kb downstream 1.0kb downstream 3814 true Chr3: 21823696-21827509 Arabidopsis thaliana
AT3G59050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21823696-21824695 Arabidopsis thaliana
AT3G59050 2.0kb upstream 2.0kb upstream 4814 true Chr3: 21824696-21829509 Arabidopsis thaliana
AT3G59050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21827510-21829509 Arabidopsis thaliana
AT3G59050 2.0kb downstream 2.0kb downstream 4814 true Chr3: 21822696-21827509 Arabidopsis thaliana
AT3G59050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21822696-21824695 Arabidopsis thaliana
AT3G59050 5.0kb upstream 5.0kb upstream 7814 true Chr3: 21824696-21832509 Arabidopsis thaliana
AT3G59050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21827510-21832509 Arabidopsis thaliana
AT3G59050 5.0kb downstream 5.0kb downstream 7814 true Chr3: 21819696-21827509 Arabidopsis thaliana
AT3G59050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21819696-21824695 Arabidopsis thaliana
AT3G59050 10.0kb upstream 10.0kb upstream 12814 true Chr3: 21824696-21837509 Arabidopsis thaliana
AT3G59050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21827510-21837509 Arabidopsis thaliana
AT3G59050 10.0kb downstream 10.0kb downstream 12814 true Chr3: 21814696-21827509 Arabidopsis thaliana
AT3G59050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21814696-21824695 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369311 5261 Brassicaceae View MSA
123799754 5264 Brassicales-Malvales View MSA
124297243 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain