Gene : AT3G59000 A. thaliana TAIR10
Defline:  (1 of 43) PTHR31639//PTHR31639:SF6 - FAMILY NOT NAMED // FBD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4956
Name:  ? AT3G59000 Secondary Identifier:  ? PAC:19663111
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59000 0.5kb upstream 0.5kb upstream 2968 true Chr3: 21798776-21801743 Arabidopsis thaliana
AT3G59000 0.5kb upstream 0.5kb upstream 500 false Chr3: 21798776-21799275 Arabidopsis thaliana
AT3G59000 0.5kb downstream 0.5kb downstream 2968 true Chr3: 21799276-21802243 Arabidopsis thaliana
AT3G59000 0.5kb downstream 0.5kb downstream 500 false Chr3: 21801744-21802243 Arabidopsis thaliana
AT3G59000 1.0kb upstream 1.0kb upstream 3468 true Chr3: 21798276-21801743 Arabidopsis thaliana
AT3G59000 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21798276-21799275 Arabidopsis thaliana
AT3G59000 1.0kb downstream 1.0kb downstream 3468 true Chr3: 21799276-21802743 Arabidopsis thaliana
AT3G59000 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21801744-21802743 Arabidopsis thaliana
AT3G59000 2.0kb upstream 2.0kb upstream 4468 true Chr3: 21797276-21801743 Arabidopsis thaliana
AT3G59000 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21797276-21799275 Arabidopsis thaliana
AT3G59000 2.0kb downstream 2.0kb downstream 4468 true Chr3: 21799276-21803743 Arabidopsis thaliana
AT3G59000 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21801744-21803743 Arabidopsis thaliana
AT3G59000 5.0kb upstream 5.0kb upstream 7468 true Chr3: 21794276-21801743 Arabidopsis thaliana
AT3G59000 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21794276-21799275 Arabidopsis thaliana
AT3G59000 5.0kb downstream 5.0kb downstream 7468 true Chr3: 21799276-21806743 Arabidopsis thaliana
AT3G59000 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21801744-21806743 Arabidopsis thaliana
AT3G59000 10.0kb upstream 10.0kb upstream 12468 true Chr3: 21789276-21801743 Arabidopsis thaliana
AT3G59000 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21789276-21799275 Arabidopsis thaliana
AT3G59000 10.0kb downstream 10.0kb downstream 12468 true Chr3: 21799276-21811743 Arabidopsis thaliana
AT3G59000 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21801744-21811743 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373689 5261 Brassicaceae View MSA
123800601 5264 Brassicales-Malvales View MSA
124350537 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.184        
cufflinks 1.987       High
cufflinks 1.141        
cufflinks 1.802        
cufflinks 1.068       Low
cufflinks 1.783        

0 Strain