Gene : AT3G59100 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12741//PTHR12741:SF16 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // CALLOSE SYNTHASE 7-RELATED Genomic Order:  4967
Name:  ? AT3G59100 Secondary Identifier:  ? PAC:19660773
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6773 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59100 0.5kb upstream 0.5kb upstream 10954 true Chr3: 21842907-21853860 Arabidopsis thaliana
AT3G59100 0.5kb upstream 0.5kb upstream 500 false Chr3: 21842907-21843406 Arabidopsis thaliana
AT3G59100 0.5kb downstream 0.5kb downstream 10954 true Chr3: 21843407-21854360 Arabidopsis thaliana
AT3G59100 0.5kb downstream 0.5kb downstream 500 false Chr3: 21853861-21854360 Arabidopsis thaliana
AT3G59100 1.0kb upstream 1.0kb upstream 11454 true Chr3: 21842407-21853860 Arabidopsis thaliana
AT3G59100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21842407-21843406 Arabidopsis thaliana
AT3G59100 1.0kb downstream 1.0kb downstream 11454 true Chr3: 21843407-21854860 Arabidopsis thaliana
AT3G59100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21853861-21854860 Arabidopsis thaliana
AT3G59100 2.0kb upstream 2.0kb upstream 12454 true Chr3: 21841407-21853860 Arabidopsis thaliana
AT3G59100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21841407-21843406 Arabidopsis thaliana
AT3G59100 2.0kb downstream 2.0kb downstream 12454 true Chr3: 21843407-21855860 Arabidopsis thaliana
AT3G59100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21853861-21855860 Arabidopsis thaliana
AT3G59100 5.0kb upstream 5.0kb upstream 15454 true Chr3: 21838407-21853860 Arabidopsis thaliana
AT3G59100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21838407-21843406 Arabidopsis thaliana
AT3G59100 5.0kb downstream 5.0kb downstream 15454 true Chr3: 21843407-21858860 Arabidopsis thaliana
AT3G59100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21853861-21858860 Arabidopsis thaliana
AT3G59100 10.0kb upstream 10.0kb upstream 20454 true Chr3: 21833407-21853860 Arabidopsis thaliana
AT3G59100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21833407-21843406 Arabidopsis thaliana
AT3G59100 10.0kb downstream 10.0kb downstream 20454 true Chr3: 21843407-21863860 Arabidopsis thaliana
AT3G59100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21853861-21863860 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365522 5261 Brassicaceae View MSA
123839457 5264 Brassicales-Malvales View MSA
124345846 5266 SBM View MSA
124242779 5268 Malvidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.688        
cufflinks 8.971        
cufflinks 1.966        
cufflinks 8.369        
cufflinks 1.533       Low
cufflinks 8.898        

0 Strain