Gene : AT3G58830 A. thaliana TAIR10
Defline:  (1 of 1) K01094 - phosphatidylglycerophosphatase GEP4 (GEP4) Genomic Order:  4939
Name:  ? AT3G58830 Secondary Identifier:  ? PAC:19661791
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY4FS-7 Arabidopsis thaliana pathologic  
Athaliana PWY-5269 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58830 0.5kb upstream 0.5kb upstream 2089 true Chr3: 21755053-21757141 Arabidopsis thaliana
AT3G58830 0.5kb upstream 0.5kb upstream 500 false Chr3: 21756642-21757141 Arabidopsis thaliana
AT3G58830 0.5kb downstream 0.5kb downstream 2089 true Chr3: 21754553-21756641 Arabidopsis thaliana
AT3G58830 0.5kb downstream 0.5kb downstream 500 false Chr3: 21754553-21755052 Arabidopsis thaliana
AT3G58830 1.0kb upstream 1.0kb upstream 2589 true Chr3: 21755053-21757641 Arabidopsis thaliana
AT3G58830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21756642-21757641 Arabidopsis thaliana
AT3G58830 1.0kb downstream 1.0kb downstream 2589 true Chr3: 21754053-21756641 Arabidopsis thaliana
AT3G58830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21754053-21755052 Arabidopsis thaliana
AT3G58830 2.0kb upstream 2.0kb upstream 3589 true Chr3: 21755053-21758641 Arabidopsis thaliana
AT3G58830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21756642-21758641 Arabidopsis thaliana
AT3G58830 2.0kb downstream 2.0kb downstream 3589 true Chr3: 21753053-21756641 Arabidopsis thaliana
AT3G58830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21753053-21755052 Arabidopsis thaliana
AT3G58830 5.0kb upstream 5.0kb upstream 6589 true Chr3: 21755053-21761641 Arabidopsis thaliana
AT3G58830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21756642-21761641 Arabidopsis thaliana
AT3G58830 5.0kb downstream 5.0kb downstream 6589 true Chr3: 21750053-21756641 Arabidopsis thaliana
AT3G58830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21750053-21755052 Arabidopsis thaliana
AT3G58830 10.0kb upstream 10.0kb upstream 11589 true Chr3: 21755053-21766641 Arabidopsis thaliana
AT3G58830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21756642-21766641 Arabidopsis thaliana
AT3G58830 10.0kb downstream 10.0kb downstream 11589 true Chr3: 21745053-21756641 Arabidopsis thaliana
AT3G58830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21745053-21755052 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373083 5261 Brassicaceae View MSA
123834432 5264 Brassicales-Malvales View MSA
124340921 5266 SBM View MSA
124244311 5268 Malvidae View MSA
124061153 5270 Rosid View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.784        
cufflinks 8.287        
cufflinks 20.705       High
cufflinks 8.256        
cufflinks 14.869        
cufflinks 8.133        

0 Strain