Gene : AT3G58660 A. thaliana TAIR10
Defline:  (1 of 3) K14775 - ribosome biogenesis protein UTP30 (UTP30, RSL1D1) Genomic Order:  4921
Name:  ? AT3G58660 Secondary Identifier:  ? PAC:19660413
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58660 0.5kb upstream 0.5kb upstream 2081 true Chr3: 21701034-21703114 Arabidopsis thaliana
AT3G58660 0.5kb upstream 0.5kb upstream 500 false Chr3: 21701034-21701533 Arabidopsis thaliana
AT3G58660 0.5kb downstream 0.5kb downstream 2081 true Chr3: 21701534-21703614 Arabidopsis thaliana
AT3G58660 0.5kb downstream 0.5kb downstream 500 false Chr3: 21703115-21703614 Arabidopsis thaliana
AT3G58660 1.0kb upstream 1.0kb upstream 2581 true Chr3: 21700534-21703114 Arabidopsis thaliana
AT3G58660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21700534-21701533 Arabidopsis thaliana
AT3G58660 1.0kb downstream 1.0kb downstream 2581 true Chr3: 21701534-21704114 Arabidopsis thaliana
AT3G58660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21703115-21704114 Arabidopsis thaliana
AT3G58660 2.0kb upstream 2.0kb upstream 3581 true Chr3: 21699534-21703114 Arabidopsis thaliana
AT3G58660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21699534-21701533 Arabidopsis thaliana
AT3G58660 2.0kb downstream 2.0kb downstream 3581 true Chr3: 21701534-21705114 Arabidopsis thaliana
AT3G58660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21703115-21705114 Arabidopsis thaliana
AT3G58660 5.0kb upstream 5.0kb upstream 6581 true Chr3: 21696534-21703114 Arabidopsis thaliana
AT3G58660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21696534-21701533 Arabidopsis thaliana
AT3G58660 5.0kb downstream 5.0kb downstream 6581 true Chr3: 21701534-21708114 Arabidopsis thaliana
AT3G58660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21703115-21708114 Arabidopsis thaliana
AT3G58660 10.0kb upstream 10.0kb upstream 11581 true Chr3: 21691534-21703114 Arabidopsis thaliana
AT3G58660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21691534-21701533 Arabidopsis thaliana
AT3G58660 10.0kb downstream 10.0kb downstream 11581 true Chr3: 21701534-21713114 Arabidopsis thaliana
AT3G58660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21703115-21713114 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373157 5261 Brassicaceae View MSA
123833753 5264 Brassicales-Malvales View MSA
124337406 5266 SBM View MSA
124250827 5268 Malvidae View MSA
124067749 5270 Rosid View MSA
123741990 5271 Pentapetalae View MSA
122792570 5272 Eudicot View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.773        
cufflinks 35.14     High  
cufflinks 17.158        
cufflinks 38.973     High  
cufflinks 13.824       Low
cufflinks 48.516     High High

0 Strain