Gene : AT3G58730 A. thaliana TAIR10
Defline:  (1 of 1) K02149 - V-type H+-transporting ATPase subunit D (ATPeV1D, ATP6M) Genomic Order:  4929
Name:  ? AT3G58730 Secondary Identifier:  ? PAC:19660990
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58730 0.5kb upstream 0.5kb upstream 2224 true Chr3: 21718257-21720480 Arabidopsis thaliana
AT3G58730 0.5kb upstream 0.5kb upstream 500 false Chr3: 21719981-21720480 Arabidopsis thaliana
AT3G58730 0.5kb downstream 0.5kb downstream 2224 true Chr3: 21717757-21719980 Arabidopsis thaliana
AT3G58730 0.5kb downstream 0.5kb downstream 500 false Chr3: 21717757-21718256 Arabidopsis thaliana
AT3G58730 1.0kb upstream 1.0kb upstream 2724 true Chr3: 21718257-21720980 Arabidopsis thaliana
AT3G58730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21719981-21720980 Arabidopsis thaliana
AT3G58730 1.0kb downstream 1.0kb downstream 2724 true Chr3: 21717257-21719980 Arabidopsis thaliana
AT3G58730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21717257-21718256 Arabidopsis thaliana
AT3G58730 2.0kb upstream 2.0kb upstream 3724 true Chr3: 21718257-21721980 Arabidopsis thaliana
AT3G58730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21719981-21721980 Arabidopsis thaliana
AT3G58730 2.0kb downstream 2.0kb downstream 3724 true Chr3: 21716257-21719980 Arabidopsis thaliana
AT3G58730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21716257-21718256 Arabidopsis thaliana
AT3G58730 5.0kb upstream 5.0kb upstream 6724 true Chr3: 21718257-21724980 Arabidopsis thaliana
AT3G58730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21719981-21724980 Arabidopsis thaliana
AT3G58730 5.0kb downstream 5.0kb downstream 6724 true Chr3: 21713257-21719980 Arabidopsis thaliana
AT3G58730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21713257-21718256 Arabidopsis thaliana
AT3G58730 10.0kb upstream 10.0kb upstream 11724 true Chr3: 21718257-21729980 Arabidopsis thaliana
AT3G58730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21719981-21729980 Arabidopsis thaliana
AT3G58730 10.0kb downstream 10.0kb downstream 11724 true Chr3: 21708257-21719980 Arabidopsis thaliana
AT3G58730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21708257-21718256 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375883 5261 Brassicaceae View MSA
123835258 5264 Brassicales-Malvales View MSA
124338244 5266 SBM View MSA
124241593 5268 Malvidae View MSA
124068581 5270 Rosid View MSA
123747153 5271 Pentapetalae View MSA
122793395 5272 Eudicot View MSA
122045398 5273 Angiosperm View MSA
121346383 5274 Embryophyte View MSA
123424080 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.399     High High
cufflinks 68.049     High Low
cufflinks 87.879     High  
cufflinks 67.716     High Low
cufflinks 91.429     High  
cufflinks 80.134     High  

0 Strain