Gene : AT3G58440 A. thaliana TAIR10
Defline:  (1 of 64) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  4899
Name:  ? AT3G58440 Secondary Identifier:  ? PAC:19659260
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58440 0.5kb upstream 0.5kb upstream 3304 true Chr3: 21618446-21621749 Arabidopsis thaliana
AT3G58440 0.5kb upstream 0.5kb upstream 500 false Chr3: 21621250-21621749 Arabidopsis thaliana
AT3G58440 0.5kb downstream 0.5kb downstream 3304 true Chr3: 21617946-21621249 Arabidopsis thaliana
AT3G58440 0.5kb downstream 0.5kb downstream 500 false Chr3: 21617946-21618445 Arabidopsis thaliana
AT3G58440 1.0kb upstream 1.0kb upstream 3804 true Chr3: 21618446-21622249 Arabidopsis thaliana
AT3G58440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21621250-21622249 Arabidopsis thaliana
AT3G58440 1.0kb downstream 1.0kb downstream 3804 true Chr3: 21617446-21621249 Arabidopsis thaliana
AT3G58440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21617446-21618445 Arabidopsis thaliana
AT3G58440 2.0kb upstream 2.0kb upstream 4804 true Chr3: 21618446-21623249 Arabidopsis thaliana
AT3G58440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21621250-21623249 Arabidopsis thaliana
AT3G58440 2.0kb downstream 2.0kb downstream 4804 true Chr3: 21616446-21621249 Arabidopsis thaliana
AT3G58440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21616446-21618445 Arabidopsis thaliana
AT3G58440 5.0kb upstream 5.0kb upstream 7804 true Chr3: 21618446-21626249 Arabidopsis thaliana
AT3G58440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21621250-21626249 Arabidopsis thaliana
AT3G58440 5.0kb downstream 5.0kb downstream 7804 true Chr3: 21613446-21621249 Arabidopsis thaliana
AT3G58440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21613446-21618445 Arabidopsis thaliana
AT3G58440 10.0kb upstream 10.0kb upstream 12804 true Chr3: 21618446-21631249 Arabidopsis thaliana
AT3G58440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21621250-21631249 Arabidopsis thaliana
AT3G58440 10.0kb downstream 10.0kb downstream 12804 true Chr3: 21608446-21621249 Arabidopsis thaliana
AT3G58440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21608446-21618445 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512068 5273 Angiosperm View MSA
122380264 5261 Brassicaceae View MSA
123802629 5264 Brassicales-Malvales View MSA
124299810 5266 SBM View MSA
124151131 5268 Malvidae View MSA
123876632 5270 Rosid View MSA
123460282 5271 Pentapetalae View MSA
122495659 5272 Eudicot View MSA
120785094 5274 Embryophyte View MSA
122826967 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain