Gene : XIJ A. thaliana TAIR10
Primary Identifier:  ? AT3G58160 Defline:  (1 of 1) PTHR13140//PTHR13140:SF471 - MYOSIN // MYOSIN-16
Genomic Order:  4871 Name:  ? AT3G58160
Secondary Identifier:  ? PAC:19660616
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58160 0.5kb upstream 0.5kb upstream 7581 true Chr3: 21534297-21541877 Arabidopsis thaliana
AT3G58160 0.5kb upstream 0.5kb upstream 500 false Chr3: 21534297-21534796 Arabidopsis thaliana
AT3G58160 0.5kb downstream 0.5kb downstream 7581 true Chr3: 21534797-21542377 Arabidopsis thaliana
AT3G58160 0.5kb downstream 0.5kb downstream 500 false Chr3: 21541878-21542377 Arabidopsis thaliana
AT3G58160 1.0kb upstream 1.0kb upstream 8081 true Chr3: 21533797-21541877 Arabidopsis thaliana
AT3G58160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21533797-21534796 Arabidopsis thaliana
AT3G58160 1.0kb downstream 1.0kb downstream 8081 true Chr3: 21534797-21542877 Arabidopsis thaliana
AT3G58160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21541878-21542877 Arabidopsis thaliana
AT3G58160 2.0kb upstream 2.0kb upstream 9081 true Chr3: 21532797-21541877 Arabidopsis thaliana
AT3G58160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21532797-21534796 Arabidopsis thaliana
AT3G58160 2.0kb downstream 2.0kb downstream 9081 true Chr3: 21534797-21543877 Arabidopsis thaliana
AT3G58160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21541878-21543877 Arabidopsis thaliana
AT3G58160 5.0kb upstream 5.0kb upstream 12081 true Chr3: 21529797-21541877 Arabidopsis thaliana
AT3G58160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21529797-21534796 Arabidopsis thaliana
AT3G58160 5.0kb downstream 5.0kb downstream 12081 true Chr3: 21534797-21546877 Arabidopsis thaliana
AT3G58160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21541878-21546877 Arabidopsis thaliana
AT3G58160 10.0kb upstream 10.0kb upstream 17081 true Chr3: 21524797-21541877 Arabidopsis thaliana
AT3G58160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21524797-21534796 Arabidopsis thaliana
AT3G58160 10.0kb downstream 10.0kb downstream 17081 true Chr3: 21534797-21551877 Arabidopsis thaliana
AT3G58160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21541878-21551877 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030139 5273 Angiosperm View MSA
122377511 5261 Brassicaceae View MSA
123827640 5264 Brassicales-Malvales View MSA
124350060 5266 SBM View MSA
124245638 5268 Malvidae View MSA
124050875 5270 Rosid View MSA
123749915 5271 Pentapetalae View MSA
122797228 5272 Eudicot View MSA
121299358 5274 Embryophyte View MSA
123337237 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.264        
cufflinks 2.993        
cufflinks 3.556       High
cufflinks 2.997        
cufflinks 2.991        
cufflinks 1.566       Low

0 Strain