Gene : AT3G58210 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  4876
Name:  ? AT3G58210 Secondary Identifier:  ? PAC:19663365
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58210 0.5kb upstream 0.5kb upstream 2126 true Chr3: 21562442-21564567 Arabidopsis thaliana
AT3G58210 0.5kb upstream 0.5kb upstream 500 false Chr3: 21564068-21564567 Arabidopsis thaliana
AT3G58210 0.5kb downstream 0.5kb downstream 2126 true Chr3: 21561942-21564067 Arabidopsis thaliana
AT3G58210 0.5kb downstream 0.5kb downstream 500 false Chr3: 21561942-21562441 Arabidopsis thaliana
AT3G58210 1.0kb upstream 1.0kb upstream 2626 true Chr3: 21562442-21565067 Arabidopsis thaliana
AT3G58210 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21564068-21565067 Arabidopsis thaliana
AT3G58210 1.0kb downstream 1.0kb downstream 2626 true Chr3: 21561442-21564067 Arabidopsis thaliana
AT3G58210 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21561442-21562441 Arabidopsis thaliana
AT3G58210 2.0kb upstream 2.0kb upstream 3626 true Chr3: 21562442-21566067 Arabidopsis thaliana
AT3G58210 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21564068-21566067 Arabidopsis thaliana
AT3G58210 2.0kb downstream 2.0kb downstream 3626 true Chr3: 21560442-21564067 Arabidopsis thaliana
AT3G58210 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21560442-21562441 Arabidopsis thaliana
AT3G58210 5.0kb upstream 5.0kb upstream 6626 true Chr3: 21562442-21569067 Arabidopsis thaliana
AT3G58210 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21564068-21569067 Arabidopsis thaliana
AT3G58210 5.0kb downstream 5.0kb downstream 6626 true Chr3: 21557442-21564067 Arabidopsis thaliana
AT3G58210 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21557442-21562441 Arabidopsis thaliana
AT3G58210 10.0kb upstream 10.0kb upstream 11626 true Chr3: 21562442-21574067 Arabidopsis thaliana
AT3G58210 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21564068-21574067 Arabidopsis thaliana
AT3G58210 10.0kb downstream 10.0kb downstream 11626 true Chr3: 21552442-21564067 Arabidopsis thaliana
AT3G58210 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21552442-21562441 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  

0 Strain