Gene : GIS A. thaliana TAIR10
Primary Identifier:  ? AT3G58070 Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6)
Genomic Order:  4862 Name:  ? AT3G58070
Secondary Identifier:  ? PAC:19660690
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58070 0.5kb upstream 0.5kb upstream 1542 true Chr3: 21506613-21508154 Arabidopsis thaliana
AT3G58070 0.5kb upstream 0.5kb upstream 500 false Chr3: 21507655-21508154 Arabidopsis thaliana
AT3G58070 0.5kb downstream 0.5kb downstream 1542 true Chr3: 21506113-21507654 Arabidopsis thaliana
AT3G58070 0.5kb downstream 0.5kb downstream 500 false Chr3: 21506113-21506612 Arabidopsis thaliana
AT3G58070 1.0kb upstream 1.0kb upstream 2042 true Chr3: 21506613-21508654 Arabidopsis thaliana
AT3G58070 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21507655-21508654 Arabidopsis thaliana
AT3G58070 1.0kb downstream 1.0kb downstream 2042 true Chr3: 21505613-21507654 Arabidopsis thaliana
AT3G58070 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21505613-21506612 Arabidopsis thaliana
AT3G58070 2.0kb upstream 2.0kb upstream 3042 true Chr3: 21506613-21509654 Arabidopsis thaliana
AT3G58070 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21507655-21509654 Arabidopsis thaliana
AT3G58070 2.0kb downstream 2.0kb downstream 3042 true Chr3: 21504613-21507654 Arabidopsis thaliana
AT3G58070 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21504613-21506612 Arabidopsis thaliana
AT3G58070 5.0kb upstream 5.0kb upstream 6042 true Chr3: 21506613-21512654 Arabidopsis thaliana
AT3G58070 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21507655-21512654 Arabidopsis thaliana
AT3G58070 5.0kb downstream 5.0kb downstream 6042 true Chr3: 21501613-21507654 Arabidopsis thaliana
AT3G58070 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21501613-21506612 Arabidopsis thaliana
AT3G58070 10.0kb upstream 10.0kb upstream 11042 true Chr3: 21506613-21517654 Arabidopsis thaliana
AT3G58070 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21507655-21517654 Arabidopsis thaliana
AT3G58070 10.0kb downstream 10.0kb downstream 11042 true Chr3: 21496613-21507654 Arabidopsis thaliana
AT3G58070 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21496613-21506612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371824 5261 Brassicaceae View MSA
123841655 5264 Brassicales-Malvales View MSA
124344163 5266 SBM View MSA
124241101 5268 Malvidae View MSA
124068239 5270 Rosid View MSA
123744068 5271 Pentapetalae View MSA
122791696 5272 Eudicot View MSA
122047556 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.772        
cufflinks 0.015     Low Low
cufflinks 2.998        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.632        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain