Gene : AT3G57890 A. thaliana TAIR10
Defline:  (1 of 1) K16810 - TBCC domain-containing protein 1 (TBCCD1) Genomic Order:  4843
Name:  ? AT3G57890 Secondary Identifier:  ? PAC:19663414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57890 0.5kb upstream 0.5kb upstream 4438 true Chr3: 21437584-21442021 Arabidopsis thaliana
AT3G57890 0.5kb upstream 0.5kb upstream 500 false Chr3: 21437584-21438083 Arabidopsis thaliana
AT3G57890 0.5kb downstream 0.5kb downstream 4438 true Chr3: 21438084-21442521 Arabidopsis thaliana
AT3G57890 0.5kb downstream 0.5kb downstream 500 false Chr3: 21442022-21442521 Arabidopsis thaliana
AT3G57890 1.0kb upstream 1.0kb upstream 4938 true Chr3: 21437084-21442021 Arabidopsis thaliana
AT3G57890 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21437084-21438083 Arabidopsis thaliana
AT3G57890 1.0kb downstream 1.0kb downstream 4938 true Chr3: 21438084-21443021 Arabidopsis thaliana
AT3G57890 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21442022-21443021 Arabidopsis thaliana
AT3G57890 2.0kb upstream 2.0kb upstream 5938 true Chr3: 21436084-21442021 Arabidopsis thaliana
AT3G57890 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21436084-21438083 Arabidopsis thaliana
AT3G57890 2.0kb downstream 2.0kb downstream 5938 true Chr3: 21438084-21444021 Arabidopsis thaliana
AT3G57890 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21442022-21444021 Arabidopsis thaliana
AT3G57890 5.0kb upstream 5.0kb upstream 8938 true Chr3: 21433084-21442021 Arabidopsis thaliana
AT3G57890 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21433084-21438083 Arabidopsis thaliana
AT3G57890 5.0kb downstream 5.0kb downstream 8938 true Chr3: 21438084-21447021 Arabidopsis thaliana
AT3G57890 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21442022-21447021 Arabidopsis thaliana
AT3G57890 10.0kb upstream 10.0kb upstream 13938 true Chr3: 21428084-21442021 Arabidopsis thaliana
AT3G57890 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21428084-21438083 Arabidopsis thaliana
AT3G57890 10.0kb downstream 10.0kb downstream 13938 true Chr3: 21438084-21452021 Arabidopsis thaliana
AT3G57890 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21442022-21452021 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365125 5261 Brassicaceae View MSA
123839772 5264 Brassicales-Malvales View MSA
124338624 5266 SBM View MSA
124247870 5268 Malvidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.235        
cufflinks 8.97        
cufflinks 7.383        
cufflinks 9.503        
cufflinks 7.585        
cufflinks 11.267       High

0 Strain