Gene : AT3G49980 A. thaliana TAIR10
Defline:  (1 of 33) PTHR32133:SF82 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  4003
Name:  ? AT3G49980 Secondary Identifier:  ? PAC:19660627
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49980 0.5kb upstream 0.5kb upstream 1649 true Chr3: 18530329-18531977 Arabidopsis thaliana
AT3G49980 0.5kb upstream 0.5kb upstream 500 false Chr3: 18531478-18531977 Arabidopsis thaliana
AT3G49980 0.5kb downstream 0.5kb downstream 1649 true Chr3: 18529829-18531477 Arabidopsis thaliana
AT3G49980 0.5kb downstream 0.5kb downstream 500 false Chr3: 18529829-18530328 Arabidopsis thaliana
AT3G49980 1.0kb upstream 1.0kb upstream 2149 true Chr3: 18530329-18532477 Arabidopsis thaliana
AT3G49980 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18531478-18532477 Arabidopsis thaliana
AT3G49980 1.0kb downstream 1.0kb downstream 2149 true Chr3: 18529329-18531477 Arabidopsis thaliana
AT3G49980 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18529329-18530328 Arabidopsis thaliana
AT3G49980 2.0kb upstream 2.0kb upstream 3149 true Chr3: 18530329-18533477 Arabidopsis thaliana
AT3G49980 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18531478-18533477 Arabidopsis thaliana
AT3G49980 2.0kb downstream 2.0kb downstream 3149 true Chr3: 18528329-18531477 Arabidopsis thaliana
AT3G49980 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18528329-18530328 Arabidopsis thaliana
AT3G49980 5.0kb upstream 5.0kb upstream 6149 true Chr3: 18530329-18536477 Arabidopsis thaliana
AT3G49980 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18531478-18536477 Arabidopsis thaliana
AT3G49980 5.0kb downstream 5.0kb downstream 6149 true Chr3: 18525329-18531477 Arabidopsis thaliana
AT3G49980 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18525329-18530328 Arabidopsis thaliana
AT3G49980 10.0kb upstream 10.0kb upstream 11149 true Chr3: 18530329-18541477 Arabidopsis thaliana
AT3G49980 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18531478-18541477 Arabidopsis thaliana
AT3G49980 10.0kb downstream 10.0kb downstream 11149 true Chr3: 18520329-18531477 Arabidopsis thaliana
AT3G49980 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18520329-18530328 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381507 5261 Brassicaceae View MSA
123803280 5264 Brassicales-Malvales View MSA
124349957 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain