Gene : AT3G49560 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14110//PTHR14110:SF6 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 // SUBFAMILY NOT NAMED Genomic Order:  3955
Name:  ? AT3G49560 Secondary Identifier:  ? PAC:19665064
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49560 0.5kb upstream 0.5kb upstream 2076 true Chr3: 18370064-18372139 Arabidopsis thaliana
AT3G49560 0.5kb upstream 0.5kb upstream 500 false Chr3: 18370064-18370563 Arabidopsis thaliana
AT3G49560 0.5kb downstream 0.5kb downstream 2076 true Chr3: 18370564-18372639 Arabidopsis thaliana
AT3G49560 0.5kb downstream 0.5kb downstream 500 false Chr3: 18372140-18372639 Arabidopsis thaliana
AT3G49560 1.0kb upstream 1.0kb upstream 2576 true Chr3: 18369564-18372139 Arabidopsis thaliana
AT3G49560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18369564-18370563 Arabidopsis thaliana
AT3G49560 1.0kb downstream 1.0kb downstream 2576 true Chr3: 18370564-18373139 Arabidopsis thaliana
AT3G49560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18372140-18373139 Arabidopsis thaliana
AT3G49560 2.0kb upstream 2.0kb upstream 3576 true Chr3: 18368564-18372139 Arabidopsis thaliana
AT3G49560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18368564-18370563 Arabidopsis thaliana
AT3G49560 2.0kb downstream 2.0kb downstream 3576 true Chr3: 18370564-18374139 Arabidopsis thaliana
AT3G49560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18372140-18374139 Arabidopsis thaliana
AT3G49560 5.0kb upstream 5.0kb upstream 6576 true Chr3: 18365564-18372139 Arabidopsis thaliana
AT3G49560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18365564-18370563 Arabidopsis thaliana
AT3G49560 5.0kb downstream 5.0kb downstream 6576 true Chr3: 18370564-18377139 Arabidopsis thaliana
AT3G49560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18372140-18377139 Arabidopsis thaliana
AT3G49560 10.0kb upstream 10.0kb upstream 11576 true Chr3: 18360564-18372139 Arabidopsis thaliana
AT3G49560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18360564-18370563 Arabidopsis thaliana
AT3G49560 10.0kb downstream 10.0kb downstream 11576 true Chr3: 18370564-18382139 Arabidopsis thaliana
AT3G49560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18372140-18382139 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363079 5261 Brassicaceae View MSA
123798473 5264 Brassicales-Malvales View MSA
124296104 5266 SBM View MSA
124148355 5268 Malvidae View MSA
124063429 5270 Rosid View MSA
123741694 5271 Pentapetalae View MSA
122789967 5272 Eudicot View MSA
122045170 5273 Angiosperm View MSA
121345051 5274 Embryophyte View MSA
123428187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.142     High  
cufflinks 18.134       Low
cufflinks 50.172     High  
cufflinks 19.95        
cufflinks 44.409     High  
cufflinks 19.304        

0 Strain