Gene : AT3G49160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11817:SF28 - PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC Genomic Order:  3913
Name:  ? AT3G49160 Secondary Identifier:  ? PAC:19663694
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49160 0.5kb upstream 0.5kb upstream 3392 true Chr3: 18221994-18225385 Arabidopsis thaliana
AT3G49160 0.5kb upstream 0.5kb upstream 500 false Chr3: 18224886-18225385 Arabidopsis thaliana
AT3G49160 0.5kb downstream 0.5kb downstream 3392 true Chr3: 18221494-18224885 Arabidopsis thaliana
AT3G49160 0.5kb downstream 0.5kb downstream 500 false Chr3: 18221494-18221993 Arabidopsis thaliana
AT3G49160 1.0kb upstream 1.0kb upstream 3892 true Chr3: 18221994-18225885 Arabidopsis thaliana
AT3G49160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18224886-18225885 Arabidopsis thaliana
AT3G49160 1.0kb downstream 1.0kb downstream 3892 true Chr3: 18220994-18224885 Arabidopsis thaliana
AT3G49160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18220994-18221993 Arabidopsis thaliana
AT3G49160 2.0kb upstream 2.0kb upstream 4892 true Chr3: 18221994-18226885 Arabidopsis thaliana
AT3G49160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18224886-18226885 Arabidopsis thaliana
AT3G49160 2.0kb downstream 2.0kb downstream 4892 true Chr3: 18219994-18224885 Arabidopsis thaliana
AT3G49160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18219994-18221993 Arabidopsis thaliana
AT3G49160 5.0kb upstream 5.0kb upstream 7892 true Chr3: 18221994-18229885 Arabidopsis thaliana
AT3G49160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18224886-18229885 Arabidopsis thaliana
AT3G49160 5.0kb downstream 5.0kb downstream 7892 true Chr3: 18216994-18224885 Arabidopsis thaliana
AT3G49160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18216994-18221993 Arabidopsis thaliana
AT3G49160 10.0kb upstream 10.0kb upstream 12892 true Chr3: 18221994-18234885 Arabidopsis thaliana
AT3G49160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18224886-18234885 Arabidopsis thaliana
AT3G49160 10.0kb downstream 10.0kb downstream 12892 true Chr3: 18211994-18224885 Arabidopsis thaliana
AT3G49160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18211994-18221993 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364303 5261 Brassicaceae View MSA
123833815 5264 Brassicales-Malvales View MSA
124344183 5266 SBM View MSA
124244413 5268 Malvidae View MSA
124068114 5270 Rosid View MSA
123738415 5271 Pentapetalae View MSA
122787981 5272 Eudicot View MSA
122044331 5273 Angiosperm View MSA
121346943 5274 Embryophyte View MSA
123380469 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.968       Low
cufflinks 12.385       High
cufflinks 3.052        
cufflinks 4.974        
cufflinks 3.682        
cufflinks 5.906        

0 Strain