Gene : AT3G49050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21493:SF112 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  3899
Name:  ? AT3G49050 Secondary Identifier:  ? PAC:19662017
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49050 0.5kb upstream 0.5kb upstream 3285 true Chr3: 18180468-18183752 Arabidopsis thaliana
AT3G49050 0.5kb upstream 0.5kb upstream 500 false Chr3: 18180468-18180967 Arabidopsis thaliana
AT3G49050 0.5kb downstream 0.5kb downstream 3285 true Chr3: 18180968-18184252 Arabidopsis thaliana
AT3G49050 0.5kb downstream 0.5kb downstream 500 false Chr3: 18183753-18184252 Arabidopsis thaliana
AT3G49050 1.0kb upstream 1.0kb upstream 3785 true Chr3: 18179968-18183752 Arabidopsis thaliana
AT3G49050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18179968-18180967 Arabidopsis thaliana
AT3G49050 1.0kb downstream 1.0kb downstream 3785 true Chr3: 18180968-18184752 Arabidopsis thaliana
AT3G49050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18183753-18184752 Arabidopsis thaliana
AT3G49050 2.0kb upstream 2.0kb upstream 4785 true Chr3: 18178968-18183752 Arabidopsis thaliana
AT3G49050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18178968-18180967 Arabidopsis thaliana
AT3G49050 2.0kb downstream 2.0kb downstream 4785 true Chr3: 18180968-18185752 Arabidopsis thaliana
AT3G49050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18183753-18185752 Arabidopsis thaliana
AT3G49050 5.0kb upstream 5.0kb upstream 7785 true Chr3: 18175968-18183752 Arabidopsis thaliana
AT3G49050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18175968-18180967 Arabidopsis thaliana
AT3G49050 5.0kb downstream 5.0kb downstream 7785 true Chr3: 18180968-18188752 Arabidopsis thaliana
AT3G49050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18183753-18188752 Arabidopsis thaliana
AT3G49050 10.0kb upstream 10.0kb upstream 12785 true Chr3: 18170968-18183752 Arabidopsis thaliana
AT3G49050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18170968-18180967 Arabidopsis thaliana
AT3G49050 10.0kb downstream 10.0kb downstream 12785 true Chr3: 18180968-18193752 Arabidopsis thaliana
AT3G49050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18183753-18193752 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372582 5261 Brassicaceae View MSA
123827582 5264 Brassicales-Malvales View MSA
124345954 5266 SBM View MSA
124239047 5268 Malvidae View MSA
124063196 5270 Rosid View MSA
123749324 5271 Pentapetalae View MSA
122786389 5272 Eudicot View MSA
122044867 5273 Angiosperm View MSA
121350799 5274 Embryophyte View MSA
123381889 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.385        
cufflinks 10.566        
cufflinks 7.583        
cufflinks 10.276        
cufflinks 6.317       Low
cufflinks 10.201        

0 Strain