Gene : AT3G48570 A. thaliana TAIR10
Defline:  (1 of 3) K07342 - protein transport protein SEC61 subunit gamma and related proteins (SEC61G, SSS1, secE) Genomic Order:  3852
Name:  ? AT3G48570 Secondary Identifier:  ? PAC:19662400
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48570 0.5kb upstream 0.5kb upstream 1562 true Chr3: 18003913-18005474 Arabidopsis thaliana
AT3G48570 0.5kb upstream 0.5kb upstream 500 false Chr3: 18004975-18005474 Arabidopsis thaliana
AT3G48570 0.5kb downstream 0.5kb downstream 1562 true Chr3: 18003413-18004974 Arabidopsis thaliana
AT3G48570 0.5kb downstream 0.5kb downstream 500 false Chr3: 18003413-18003912 Arabidopsis thaliana
AT3G48570 1.0kb upstream 1.0kb upstream 2062 true Chr3: 18003913-18005974 Arabidopsis thaliana
AT3G48570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18004975-18005974 Arabidopsis thaliana
AT3G48570 1.0kb downstream 1.0kb downstream 2062 true Chr3: 18002913-18004974 Arabidopsis thaliana
AT3G48570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18002913-18003912 Arabidopsis thaliana
AT3G48570 2.0kb upstream 2.0kb upstream 3062 true Chr3: 18003913-18006974 Arabidopsis thaliana
AT3G48570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18004975-18006974 Arabidopsis thaliana
AT3G48570 2.0kb downstream 2.0kb downstream 3062 true Chr3: 18001913-18004974 Arabidopsis thaliana
AT3G48570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18001913-18003912 Arabidopsis thaliana
AT3G48570 5.0kb upstream 5.0kb upstream 6062 true Chr3: 18003913-18009974 Arabidopsis thaliana
AT3G48570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18004975-18009974 Arabidopsis thaliana
AT3G48570 5.0kb downstream 5.0kb downstream 6062 true Chr3: 17998913-18004974 Arabidopsis thaliana
AT3G48570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17998913-18003912 Arabidopsis thaliana
AT3G48570 10.0kb upstream 10.0kb upstream 11062 true Chr3: 18003913-18014974 Arabidopsis thaliana
AT3G48570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18004975-18014974 Arabidopsis thaliana
AT3G48570 10.0kb downstream 10.0kb downstream 11062 true Chr3: 17993913-18004974 Arabidopsis thaliana
AT3G48570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17993913-18003912 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510562 5273 Angiosperm View MSA
122365454 5261 Brassicaceae View MSA
123798960 5264 Brassicales-Malvales View MSA
124296532 5266 SBM View MSA
124148656 5268 Malvidae View MSA
123874611 5270 Rosid View MSA
123458558 5271 Pentapetalae View MSA
122493962 5272 Eudicot View MSA
120783655 5274 Embryophyte View MSA
122825639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.729        
cufflinks 13.133        
cufflinks 9.36       Low
cufflinks 12.597        
cufflinks 9.01       Low
cufflinks 13.729        

0 Strain