Gene : AT3G48140 A. thaliana TAIR10
Defline:  (1 of 2) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  3799
Name:  ? AT3G48140 Secondary Identifier:  ? PAC:19664953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48140 0.5kb upstream 0.5kb upstream 1694 true Chr3: 17777856-17779549 Arabidopsis thaliana
AT3G48140 0.5kb upstream 0.5kb upstream 500 false Chr3: 17777856-17778355 Arabidopsis thaliana
AT3G48140 0.5kb downstream 0.5kb downstream 1694 true Chr3: 17778356-17780049 Arabidopsis thaliana
AT3G48140 0.5kb downstream 0.5kb downstream 500 false Chr3: 17779550-17780049 Arabidopsis thaliana
AT3G48140 1.0kb upstream 1.0kb upstream 2194 true Chr3: 17777356-17779549 Arabidopsis thaliana
AT3G48140 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17777356-17778355 Arabidopsis thaliana
AT3G48140 1.0kb downstream 1.0kb downstream 2194 true Chr3: 17778356-17780549 Arabidopsis thaliana
AT3G48140 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17779550-17780549 Arabidopsis thaliana
AT3G48140 2.0kb upstream 2.0kb upstream 3194 true Chr3: 17776356-17779549 Arabidopsis thaliana
AT3G48140 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17776356-17778355 Arabidopsis thaliana
AT3G48140 2.0kb downstream 2.0kb downstream 3194 true Chr3: 17778356-17781549 Arabidopsis thaliana
AT3G48140 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17779550-17781549 Arabidopsis thaliana
AT3G48140 5.0kb upstream 5.0kb upstream 6194 true Chr3: 17773356-17779549 Arabidopsis thaliana
AT3G48140 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17773356-17778355 Arabidopsis thaliana
AT3G48140 5.0kb downstream 5.0kb downstream 6194 true Chr3: 17778356-17784549 Arabidopsis thaliana
AT3G48140 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17779550-17784549 Arabidopsis thaliana
AT3G48140 10.0kb upstream 10.0kb upstream 11194 true Chr3: 17768356-17779549 Arabidopsis thaliana
AT3G48140 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17768356-17778355 Arabidopsis thaliana
AT3G48140 10.0kb downstream 10.0kb downstream 11194 true Chr3: 17778356-17789549 Arabidopsis thaliana
AT3G48140 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17779550-17789549 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376385 5261 Brassicaceae View MSA
123834313 5264 Brassicales-Malvales View MSA
124349900 5266 SBM View MSA
124244166 5268 Malvidae View MSA
124070084 5270 Rosid View MSA
123746560 5271 Pentapetalae View MSA
122794120 5272 Eudicot View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 152.547     High  
cufflinks 189.412     High High
cufflinks 142.481     High Low
cufflinks 182.426     High  
cufflinks 159.462     High  
cufflinks 180.076     High  

0 Strain