Gene : AT3G47833 A. thaliana TAIR10
Defline:  (1 of 13) 1.3.5.1 - Succinate dehydrogenase (quinone) / Succinic dehydrogenase Genomic Order:  3769
Name:  ? AT3G47833 Secondary Identifier:  ? PAC:19665083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-5690 Arabidopsis thaliana pathologic  
Athaliana PWY-7279 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47833 0.5kb upstream 0.5kb upstream 2018 true Chr3: 17648123-17650140 Arabidopsis thaliana
AT3G47833 0.5kb upstream 0.5kb upstream 500 false Chr3: 17648123-17648622 Arabidopsis thaliana
AT3G47833 0.5kb downstream 0.5kb downstream 2018 true Chr3: 17648623-17650640 Arabidopsis thaliana
AT3G47833 0.5kb downstream 0.5kb downstream 500 false Chr3: 17650141-17650640 Arabidopsis thaliana
AT3G47833 1.0kb upstream 1.0kb upstream 2518 true Chr3: 17647623-17650140 Arabidopsis thaliana
AT3G47833 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17647623-17648622 Arabidopsis thaliana
AT3G47833 1.0kb downstream 1.0kb downstream 2518 true Chr3: 17648623-17651140 Arabidopsis thaliana
AT3G47833 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17650141-17651140 Arabidopsis thaliana
AT3G47833 2.0kb upstream 2.0kb upstream 3518 true Chr3: 17646623-17650140 Arabidopsis thaliana
AT3G47833 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17646623-17648622 Arabidopsis thaliana
AT3G47833 2.0kb downstream 2.0kb downstream 3518 true Chr3: 17648623-17652140 Arabidopsis thaliana
AT3G47833 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17650141-17652140 Arabidopsis thaliana
AT3G47833 5.0kb upstream 5.0kb upstream 6518 true Chr3: 17643623-17650140 Arabidopsis thaliana
AT3G47833 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17643623-17648622 Arabidopsis thaliana
AT3G47833 5.0kb downstream 5.0kb downstream 6518 true Chr3: 17648623-17655140 Arabidopsis thaliana
AT3G47833 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17650141-17655140 Arabidopsis thaliana
AT3G47833 10.0kb upstream 10.0kb upstream 11518 true Chr3: 17638623-17650140 Arabidopsis thaliana
AT3G47833 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17638623-17648622 Arabidopsis thaliana
AT3G47833 10.0kb downstream 10.0kb downstream 11518 true Chr3: 17648623-17660140 Arabidopsis thaliana
AT3G47833 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17650141-17660140 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380365 5261 Brassicaceae View MSA
123827409 5264 Brassicales-Malvales View MSA
124342767 5266 SBM View MSA
124236877 5268 Malvidae View MSA
124067632 5270 Rosid View MSA
123745079 5271 Pentapetalae View MSA
122786270 5272 Eudicot View MSA
122044118 5273 Angiosperm View MSA
121344949 5274 Embryophyte View MSA
123380132 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.459       High
cufflinks 13.856        
cufflinks 17.588        
cufflinks 14.477        
cufflinks 15.724        
cufflinks 13.654       Low

0 Strain