Gene : AT3G47170 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31147:SF9 - HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  3706
Name:  ? AT3G47170 Secondary Identifier:  ? PAC:19658819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47170 0.5kb upstream 0.5kb upstream 2323 true Chr3: 17368672-17370994 Arabidopsis thaliana
AT3G47170 0.5kb upstream 0.5kb upstream 500 false Chr3: 17370495-17370994 Arabidopsis thaliana
AT3G47170 0.5kb downstream 0.5kb downstream 2323 true Chr3: 17368172-17370494 Arabidopsis thaliana
AT3G47170 0.5kb downstream 0.5kb downstream 500 false Chr3: 17368172-17368671 Arabidopsis thaliana
AT3G47170 1.0kb upstream 1.0kb upstream 2823 true Chr3: 17368672-17371494 Arabidopsis thaliana
AT3G47170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17370495-17371494 Arabidopsis thaliana
AT3G47170 1.0kb downstream 1.0kb downstream 2823 true Chr3: 17367672-17370494 Arabidopsis thaliana
AT3G47170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17367672-17368671 Arabidopsis thaliana
AT3G47170 2.0kb upstream 2.0kb upstream 3823 true Chr3: 17368672-17372494 Arabidopsis thaliana
AT3G47170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17370495-17372494 Arabidopsis thaliana
AT3G47170 2.0kb downstream 2.0kb downstream 3823 true Chr3: 17366672-17370494 Arabidopsis thaliana
AT3G47170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17366672-17368671 Arabidopsis thaliana
AT3G47170 5.0kb upstream 5.0kb upstream 6823 true Chr3: 17368672-17375494 Arabidopsis thaliana
AT3G47170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17370495-17375494 Arabidopsis thaliana
AT3G47170 5.0kb downstream 5.0kb downstream 6823 true Chr3: 17363672-17370494 Arabidopsis thaliana
AT3G47170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17363672-17368671 Arabidopsis thaliana
AT3G47170 10.0kb upstream 10.0kb upstream 11823 true Chr3: 17368672-17380494 Arabidopsis thaliana
AT3G47170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17370495-17380494 Arabidopsis thaliana
AT3G47170 10.0kb downstream 10.0kb downstream 11823 true Chr3: 17358672-17370494 Arabidopsis thaliana
AT3G47170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17358672-17368671 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375942 5261 Brassicaceae View MSA
123801093 5264 Brassicales-Malvales View MSA
124298432 5266 SBM View MSA
124252080 5268 Malvidae View MSA
124071007 5270 Rosid View MSA
123742836 5271 Pentapetalae View MSA
122794982 5272 Eudicot View MSA
122044890 5273 Angiosperm View MSA
121310354 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain