Gene : ftsh7 A. thaliana TAIR10
Primary Identifier:  ? AT3G47060 Defline:  (1 of 2) PTHR23076//PTHR23076:SF70 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED
Genomic Order:  3695 Name:  ? AT3G47060
Secondary Identifier:  ? PAC:19661509
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47060 0.5kb upstream 0.5kb upstream 4482 true Chr3: 17332485-17336966 Arabidopsis thaliana
AT3G47060 0.5kb upstream 0.5kb upstream 500 false Chr3: 17332485-17332984 Arabidopsis thaliana
AT3G47060 0.5kb downstream 0.5kb downstream 4482 true Chr3: 17332985-17337466 Arabidopsis thaliana
AT3G47060 0.5kb downstream 0.5kb downstream 500 false Chr3: 17336967-17337466 Arabidopsis thaliana
AT3G47060 1.0kb upstream 1.0kb upstream 4982 true Chr3: 17331985-17336966 Arabidopsis thaliana
AT3G47060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17331985-17332984 Arabidopsis thaliana
AT3G47060 1.0kb downstream 1.0kb downstream 4982 true Chr3: 17332985-17337966 Arabidopsis thaliana
AT3G47060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17336967-17337966 Arabidopsis thaliana
AT3G47060 2.0kb upstream 2.0kb upstream 5982 true Chr3: 17330985-17336966 Arabidopsis thaliana
AT3G47060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17330985-17332984 Arabidopsis thaliana
AT3G47060 2.0kb downstream 2.0kb downstream 5982 true Chr3: 17332985-17338966 Arabidopsis thaliana
AT3G47060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17336967-17338966 Arabidopsis thaliana
AT3G47060 5.0kb upstream 5.0kb upstream 8982 true Chr3: 17327985-17336966 Arabidopsis thaliana
AT3G47060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17327985-17332984 Arabidopsis thaliana
AT3G47060 5.0kb downstream 5.0kb downstream 8982 true Chr3: 17332985-17341966 Arabidopsis thaliana
AT3G47060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17336967-17341966 Arabidopsis thaliana
AT3G47060 10.0kb upstream 10.0kb upstream 13982 true Chr3: 17322985-17336966 Arabidopsis thaliana
AT3G47060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17322985-17332984 Arabidopsis thaliana
AT3G47060 10.0kb downstream 10.0kb downstream 13982 true Chr3: 17332985-17346966 Arabidopsis thaliana
AT3G47060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17336967-17346966 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122366481 5261 Brassicaceae View MSA
123835183 5264 Brassicales-Malvales View MSA
124351521 5266 SBM View MSA
124242131 5268 Malvidae View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.016        
cufflinks 5.283       Low
cufflinks 5.384       Low
cufflinks 5.784        
cufflinks 6.166       High
cufflinks 5.803        

0 Strain