Gene : HSD3 A. thaliana TAIR10
Primary Identifier:  ? AT3G47360 Defline:  (1 of 4) PTHR24322:SF581 - 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 2
Genomic Order:  3719 Name:  ? AT3G47360
Secondary Identifier:  ? PAC:19661308
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47360 0.5kb upstream 0.5kb upstream 2232 true Chr3: 17450612-17452843 Arabidopsis thaliana
AT3G47360 0.5kb upstream 0.5kb upstream 500 false Chr3: 17450612-17451111 Arabidopsis thaliana
AT3G47360 0.5kb downstream 0.5kb downstream 2232 true Chr3: 17451112-17453343 Arabidopsis thaliana
AT3G47360 0.5kb downstream 0.5kb downstream 500 false Chr3: 17452844-17453343 Arabidopsis thaliana
AT3G47360 1.0kb upstream 1.0kb upstream 2732 true Chr3: 17450112-17452843 Arabidopsis thaliana
AT3G47360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17450112-17451111 Arabidopsis thaliana
AT3G47360 1.0kb downstream 1.0kb downstream 2732 true Chr3: 17451112-17453843 Arabidopsis thaliana
AT3G47360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17452844-17453843 Arabidopsis thaliana
AT3G47360 2.0kb upstream 2.0kb upstream 3732 true Chr3: 17449112-17452843 Arabidopsis thaliana
AT3G47360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17449112-17451111 Arabidopsis thaliana
AT3G47360 2.0kb downstream 2.0kb downstream 3732 true Chr3: 17451112-17454843 Arabidopsis thaliana
AT3G47360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17452844-17454843 Arabidopsis thaliana
AT3G47360 5.0kb upstream 5.0kb upstream 6732 true Chr3: 17446112-17452843 Arabidopsis thaliana
AT3G47360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17446112-17451111 Arabidopsis thaliana
AT3G47360 5.0kb downstream 5.0kb downstream 6732 true Chr3: 17451112-17457843 Arabidopsis thaliana
AT3G47360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17452844-17457843 Arabidopsis thaliana
AT3G47360 10.0kb upstream 10.0kb upstream 11732 true Chr3: 17441112-17452843 Arabidopsis thaliana
AT3G47360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17441112-17451111 Arabidopsis thaliana
AT3G47360 10.0kb downstream 10.0kb downstream 11732 true Chr3: 17451112-17462843 Arabidopsis thaliana
AT3G47360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17452844-17462843 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377017 5261 Brassicaceae View MSA
123838740 5264 Brassicales-Malvales View MSA
124322494 5266 SBM View MSA
124248026 5268 Malvidae View MSA
124071912 5270 Rosid View MSA
123743335 5271 Pentapetalae View MSA
122796337 5272 Eudicot View MSA
122047684 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121345666 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.532       Low
cufflinks 8.168        
cufflinks 4.302        
cufflinks 9.554       High
cufflinks 3.613       Low
cufflinks 8.845        

0 Strain