Gene : AT3G46950 A. thaliana TAIR10
Defline:  (1 of 13) PTHR13068:SF31 - F19K23.4 PROTEIN-RELATED Genomic Order:  3684
Name:  ? AT3G46950 Secondary Identifier:  ? PAC:19663814
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46950 0.5kb upstream 0.5kb upstream 2095 true Chr3: 17288869-17290963 Arabidopsis thaliana
AT3G46950 0.5kb upstream 0.5kb upstream 500 false Chr3: 17288869-17289368 Arabidopsis thaliana
AT3G46950 0.5kb downstream 0.5kb downstream 2095 true Chr3: 17289369-17291463 Arabidopsis thaliana
AT3G46950 0.5kb downstream 0.5kb downstream 500 false Chr3: 17290964-17291463 Arabidopsis thaliana
AT3G46950 1.0kb upstream 1.0kb upstream 2595 true Chr3: 17288369-17290963 Arabidopsis thaliana
AT3G46950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17288369-17289368 Arabidopsis thaliana
AT3G46950 1.0kb downstream 1.0kb downstream 2595 true Chr3: 17289369-17291963 Arabidopsis thaliana
AT3G46950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17290964-17291963 Arabidopsis thaliana
AT3G46950 2.0kb upstream 2.0kb upstream 3595 true Chr3: 17287369-17290963 Arabidopsis thaliana
AT3G46950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17287369-17289368 Arabidopsis thaliana
AT3G46950 2.0kb downstream 2.0kb downstream 3595 true Chr3: 17289369-17292963 Arabidopsis thaliana
AT3G46950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17290964-17292963 Arabidopsis thaliana
AT3G46950 5.0kb upstream 5.0kb upstream 6595 true Chr3: 17284369-17290963 Arabidopsis thaliana
AT3G46950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17284369-17289368 Arabidopsis thaliana
AT3G46950 5.0kb downstream 5.0kb downstream 6595 true Chr3: 17289369-17295963 Arabidopsis thaliana
AT3G46950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17290964-17295963 Arabidopsis thaliana
AT3G46950 10.0kb upstream 10.0kb upstream 11595 true Chr3: 17279369-17290963 Arabidopsis thaliana
AT3G46950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17279369-17289368 Arabidopsis thaliana
AT3G46950 10.0kb downstream 10.0kb downstream 11595 true Chr3: 17289369-17300963 Arabidopsis thaliana
AT3G46950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17290964-17300963 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381426 5261 Brassicaceae View MSA
123803239 5264 Brassicales-Malvales View MSA
124300363 5266 SBM View MSA
124151561 5268 Malvidae View MSA
123876966 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.892        
cufflinks 4.446        
cufflinks 2.817        
cufflinks 4.368        
cufflinks 2.199       Low
cufflinks 3.535        

0 Strain