Gene : PHS2 A. thaliana TAIR10
Primary Identifier:  ? AT3G46970 Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC
Genomic Order:  3686 Name:  ? AT3G46970
Secondary Identifier:  ? PAC:19661669
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7238 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46970 0.5kb upstream 0.5kb upstream 5553 true Chr3: 17301394-17306946 Arabidopsis thaliana
AT3G46970 0.5kb upstream 0.5kb upstream 500 false Chr3: 17306447-17306946 Arabidopsis thaliana
AT3G46970 0.5kb downstream 0.5kb downstream 5553 true Chr3: 17300894-17306446 Arabidopsis thaliana
AT3G46970 0.5kb downstream 0.5kb downstream 500 false Chr3: 17300894-17301393 Arabidopsis thaliana
AT3G46970 1.0kb upstream 1.0kb upstream 6053 true Chr3: 17301394-17307446 Arabidopsis thaliana
AT3G46970 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17306447-17307446 Arabidopsis thaliana
AT3G46970 1.0kb downstream 1.0kb downstream 6053 true Chr3: 17300394-17306446 Arabidopsis thaliana
AT3G46970 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17300394-17301393 Arabidopsis thaliana
AT3G46970 2.0kb upstream 2.0kb upstream 7053 true Chr3: 17301394-17308446 Arabidopsis thaliana
AT3G46970 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17306447-17308446 Arabidopsis thaliana
AT3G46970 2.0kb downstream 2.0kb downstream 7053 true Chr3: 17299394-17306446 Arabidopsis thaliana
AT3G46970 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17299394-17301393 Arabidopsis thaliana
AT3G46970 5.0kb upstream 5.0kb upstream 10053 true Chr3: 17301394-17311446 Arabidopsis thaliana
AT3G46970 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17306447-17311446 Arabidopsis thaliana
AT3G46970 5.0kb downstream 5.0kb downstream 10053 true Chr3: 17296394-17306446 Arabidopsis thaliana
AT3G46970 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17296394-17301393 Arabidopsis thaliana
AT3G46970 10.0kb upstream 10.0kb upstream 15053 true Chr3: 17301394-17316446 Arabidopsis thaliana
AT3G46970 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17306447-17316446 Arabidopsis thaliana
AT3G46970 10.0kb downstream 10.0kb downstream 15053 true Chr3: 17291394-17306446 Arabidopsis thaliana
AT3G46970 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17291394-17301393 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366287 5261 Brassicaceae View MSA
123834640 5264 Brassicales-Malvales View MSA
124341676 5266 SBM View MSA
124237010 5268 Malvidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.384     High  
cufflinks 17.608        
cufflinks 172.624     High High
cufflinks 15.617        
cufflinks 150.713     High  
cufflinks 17.7        

0 Strain