Gene : AT3G52140 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12601//PTHR12601:SF6 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG Genomic Order:  4239
Name:  ? AT3G52140 Secondary Identifier:  ? PAC:19659083
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52140 0.5kb upstream 0.5kb upstream 9330 true Chr3: 19332328-19341657 Arabidopsis thaliana
AT3G52140 0.5kb upstream 0.5kb upstream 500 false Chr3: 19332328-19332827 Arabidopsis thaliana
AT3G52140 0.5kb downstream 0.5kb downstream 9330 true Chr3: 19332828-19342157 Arabidopsis thaliana
AT3G52140 0.5kb downstream 0.5kb downstream 500 false Chr3: 19341658-19342157 Arabidopsis thaliana
AT3G52140 1.0kb upstream 1.0kb upstream 9830 true Chr3: 19331828-19341657 Arabidopsis thaliana
AT3G52140 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19331828-19332827 Arabidopsis thaliana
AT3G52140 1.0kb downstream 1.0kb downstream 9830 true Chr3: 19332828-19342657 Arabidopsis thaliana
AT3G52140 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19341658-19342657 Arabidopsis thaliana
AT3G52140 2.0kb upstream 2.0kb upstream 10830 true Chr3: 19330828-19341657 Arabidopsis thaliana
AT3G52140 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19330828-19332827 Arabidopsis thaliana
AT3G52140 2.0kb downstream 2.0kb downstream 10830 true Chr3: 19332828-19343657 Arabidopsis thaliana
AT3G52140 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19341658-19343657 Arabidopsis thaliana
AT3G52140 5.0kb upstream 5.0kb upstream 13830 true Chr3: 19327828-19341657 Arabidopsis thaliana
AT3G52140 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19327828-19332827 Arabidopsis thaliana
AT3G52140 5.0kb downstream 5.0kb downstream 13830 true Chr3: 19332828-19346657 Arabidopsis thaliana
AT3G52140 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19341658-19346657 Arabidopsis thaliana
AT3G52140 10.0kb upstream 10.0kb upstream 18830 true Chr3: 19322828-19341657 Arabidopsis thaliana
AT3G52140 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19322828-19332827 Arabidopsis thaliana
AT3G52140 10.0kb downstream 10.0kb downstream 18830 true Chr3: 19332828-19351657 Arabidopsis thaliana
AT3G52140 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19341658-19351657 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370692 5261 Brassicaceae View MSA
123829890 5264 Brassicales-Malvales View MSA
124338495 5266 SBM View MSA
124237338 5268 Malvidae View MSA
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.035        
cufflinks 4.605        
cufflinks 3.476        
cufflinks 5.275       High
cufflinks 3.229       Low
cufflinks 5.18        

0 Strain