Gene : AT3G46850 A. thaliana TAIR10
Defline:  (1 of 11) PTHR10795:SF399 - CUCUMISIN-LIKE-RELATED Genomic Order:  3672
Name:  ? AT3G46850 Secondary Identifier:  ? PAC:19663376
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46850 0.5kb upstream 0.5kb upstream 3605 true Chr3: 17255838-17259442 Arabidopsis thaliana
AT3G46850 0.5kb upstream 0.5kb upstream 500 false Chr3: 17255838-17256337 Arabidopsis thaliana
AT3G46850 0.5kb downstream 0.5kb downstream 3605 true Chr3: 17256338-17259942 Arabidopsis thaliana
AT3G46850 0.5kb downstream 0.5kb downstream 500 false Chr3: 17259443-17259942 Arabidopsis thaliana
AT3G46850 1.0kb upstream 1.0kb upstream 4105 true Chr3: 17255338-17259442 Arabidopsis thaliana
AT3G46850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17255338-17256337 Arabidopsis thaliana
AT3G46850 1.0kb downstream 1.0kb downstream 4105 true Chr3: 17256338-17260442 Arabidopsis thaliana
AT3G46850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17259443-17260442 Arabidopsis thaliana
AT3G46850 2.0kb upstream 2.0kb upstream 5105 true Chr3: 17254338-17259442 Arabidopsis thaliana
AT3G46850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17254338-17256337 Arabidopsis thaliana
AT3G46850 2.0kb downstream 2.0kb downstream 5105 true Chr3: 17256338-17261442 Arabidopsis thaliana
AT3G46850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17259443-17261442 Arabidopsis thaliana
AT3G46850 5.0kb upstream 5.0kb upstream 8105 true Chr3: 17251338-17259442 Arabidopsis thaliana
AT3G46850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17251338-17256337 Arabidopsis thaliana
AT3G46850 5.0kb downstream 5.0kb downstream 8105 true Chr3: 17256338-17264442 Arabidopsis thaliana
AT3G46850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17259443-17264442 Arabidopsis thaliana
AT3G46850 10.0kb upstream 10.0kb upstream 13105 true Chr3: 17246338-17259442 Arabidopsis thaliana
AT3G46850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17246338-17256337 Arabidopsis thaliana
AT3G46850 10.0kb downstream 10.0kb downstream 13105 true Chr3: 17256338-17269442 Arabidopsis thaliana
AT3G46850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17259443-17269442 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331741 5261 Brassicaceae View MSA
123840642 5264 Brassicales-Malvales View MSA
124350203 5266 SBM View MSA
124254067 5268 Malvidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain