Gene : AT3G46060 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C Genomic Order:  3589
Name:  ? AT3G46060 Secondary Identifier:  ? PAC:19664839
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46060 0.5kb upstream 0.5kb upstream 2930 true Chr3: 16917089-16920018 Arabidopsis thaliana
AT3G46060 0.5kb upstream 0.5kb upstream 500 false Chr3: 16917089-16917588 Arabidopsis thaliana
AT3G46060 0.5kb downstream 0.5kb downstream 2930 true Chr3: 16917589-16920518 Arabidopsis thaliana
AT3G46060 0.5kb downstream 0.5kb downstream 500 false Chr3: 16920019-16920518 Arabidopsis thaliana
AT3G46060 1.0kb upstream 1.0kb upstream 3430 true Chr3: 16916589-16920018 Arabidopsis thaliana
AT3G46060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16916589-16917588 Arabidopsis thaliana
AT3G46060 1.0kb downstream 1.0kb downstream 3430 true Chr3: 16917589-16921018 Arabidopsis thaliana
AT3G46060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16920019-16921018 Arabidopsis thaliana
AT3G46060 2.0kb upstream 2.0kb upstream 4430 true Chr3: 16915589-16920018 Arabidopsis thaliana
AT3G46060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16915589-16917588 Arabidopsis thaliana
AT3G46060 2.0kb downstream 2.0kb downstream 4430 true Chr3: 16917589-16922018 Arabidopsis thaliana
AT3G46060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16920019-16922018 Arabidopsis thaliana
AT3G46060 5.0kb upstream 5.0kb upstream 7430 true Chr3: 16912589-16920018 Arabidopsis thaliana
AT3G46060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16912589-16917588 Arabidopsis thaliana
AT3G46060 5.0kb downstream 5.0kb downstream 7430 true Chr3: 16917589-16925018 Arabidopsis thaliana
AT3G46060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16920019-16925018 Arabidopsis thaliana
AT3G46060 10.0kb upstream 10.0kb upstream 12430 true Chr3: 16907589-16920018 Arabidopsis thaliana
AT3G46060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16907589-16917588 Arabidopsis thaliana
AT3G46060 10.0kb downstream 10.0kb downstream 12430 true Chr3: 16917589-16930018 Arabidopsis thaliana
AT3G46060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16920019-16930018 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369098 5261 Brassicaceae View MSA
123839908 5264 Brassicales-Malvales View MSA
124351256 5266 SBM View MSA
124253513 5268 Malvidae View MSA
124070106 5270 Rosid View MSA
123750125 5271 Pentapetalae View MSA
122789123 5272 Eudicot View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.395        
cufflinks 19.261        
cufflinks 10.269       Low
cufflinks 20.392        
cufflinks 11.912        
cufflinks 19.92        

0 Strain