Gene : AT3G46110 A. thaliana TAIR10
Defline:  (1 of 5) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  3595
Name:  ? AT3G46110 Secondary Identifier:  ? PAC:19659649
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46110 0.5kb upstream 0.5kb upstream 2115 true Chr3: 16931612-16933726 Arabidopsis thaliana
AT3G46110 0.5kb upstream 0.5kb upstream 500 false Chr3: 16931612-16932111 Arabidopsis thaliana
AT3G46110 0.5kb downstream 0.5kb downstream 2115 true Chr3: 16932112-16934226 Arabidopsis thaliana
AT3G46110 0.5kb downstream 0.5kb downstream 500 false Chr3: 16933727-16934226 Arabidopsis thaliana
AT3G46110 1.0kb upstream 1.0kb upstream 2615 true Chr3: 16931112-16933726 Arabidopsis thaliana
AT3G46110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16931112-16932111 Arabidopsis thaliana
AT3G46110 1.0kb downstream 1.0kb downstream 2615 true Chr3: 16932112-16934726 Arabidopsis thaliana
AT3G46110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16933727-16934726 Arabidopsis thaliana
AT3G46110 2.0kb upstream 2.0kb upstream 3615 true Chr3: 16930112-16933726 Arabidopsis thaliana
AT3G46110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16930112-16932111 Arabidopsis thaliana
AT3G46110 2.0kb downstream 2.0kb downstream 3615 true Chr3: 16932112-16935726 Arabidopsis thaliana
AT3G46110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16933727-16935726 Arabidopsis thaliana
AT3G46110 5.0kb upstream 5.0kb upstream 6615 true Chr3: 16927112-16933726 Arabidopsis thaliana
AT3G46110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16927112-16932111 Arabidopsis thaliana
AT3G46110 5.0kb downstream 5.0kb downstream 6615 true Chr3: 16932112-16938726 Arabidopsis thaliana
AT3G46110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16933727-16938726 Arabidopsis thaliana
AT3G46110 10.0kb upstream 10.0kb upstream 11615 true Chr3: 16922112-16933726 Arabidopsis thaliana
AT3G46110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16922112-16932111 Arabidopsis thaliana
AT3G46110 10.0kb downstream 10.0kb downstream 11615 true Chr3: 16932112-16943726 Arabidopsis thaliana
AT3G46110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16933727-16943726 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502700 5273 Angiosperm View MSA
122343421 5261 Brassicaceae View MSA
123783630 5264 Brassicales-Malvales View MSA
124281851 5266 SBM View MSA
124136535 5268 Malvidae View MSA
123864381 5270 Rosid View MSA
123449697 5271 Pentapetalae View MSA
122485227 5272 Eudicot View MSA
120776006 5274 Embryophyte View MSA
122818293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.637       High
cufflinks 2.404        
cufflinks 1.718       Low
cufflinks 2.576        
cufflinks 2.759        
cufflinks 3.31        

0 Strain