Gene : AT3G46210 A. thaliana TAIR10
Defline:  (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5) Genomic Order:  3606
Name:  ? AT3G46210 Secondary Identifier:  ? PAC:19659603
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46210 0.5kb upstream 0.5kb upstream 2738 true Chr3: 16976686-16979423 Arabidopsis thaliana
AT3G46210 0.5kb upstream 0.5kb upstream 500 false Chr3: 16978924-16979423 Arabidopsis thaliana
AT3G46210 0.5kb downstream 0.5kb downstream 2738 true Chr3: 16976186-16978923 Arabidopsis thaliana
AT3G46210 0.5kb downstream 0.5kb downstream 500 false Chr3: 16976186-16976685 Arabidopsis thaliana
AT3G46210 1.0kb upstream 1.0kb upstream 3238 true Chr3: 16976686-16979923 Arabidopsis thaliana
AT3G46210 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16978924-16979923 Arabidopsis thaliana
AT3G46210 1.0kb downstream 1.0kb downstream 3238 true Chr3: 16975686-16978923 Arabidopsis thaliana
AT3G46210 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16975686-16976685 Arabidopsis thaliana
AT3G46210 2.0kb upstream 2.0kb upstream 4238 true Chr3: 16976686-16980923 Arabidopsis thaliana
AT3G46210 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16978924-16980923 Arabidopsis thaliana
AT3G46210 2.0kb downstream 2.0kb downstream 4238 true Chr3: 16974686-16978923 Arabidopsis thaliana
AT3G46210 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16974686-16976685 Arabidopsis thaliana
AT3G46210 5.0kb upstream 5.0kb upstream 7238 true Chr3: 16976686-16983923 Arabidopsis thaliana
AT3G46210 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16978924-16983923 Arabidopsis thaliana
AT3G46210 5.0kb downstream 5.0kb downstream 7238 true Chr3: 16971686-16978923 Arabidopsis thaliana
AT3G46210 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16971686-16976685 Arabidopsis thaliana
AT3G46210 10.0kb upstream 10.0kb upstream 12238 true Chr3: 16976686-16988923 Arabidopsis thaliana
AT3G46210 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16978924-16988923 Arabidopsis thaliana
AT3G46210 10.0kb downstream 10.0kb downstream 12238 true Chr3: 16966686-16978923 Arabidopsis thaliana
AT3G46210 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16966686-16976685 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365223 5261 Brassicaceae View MSA
123827346 5264 Brassicales-Malvales View MSA
124340907 5266 SBM View MSA
124243349 5268 Malvidae View MSA
124063163 5270 Rosid View MSA
123740282 5271 Pentapetalae View MSA
122793891 5272 Eudicot View MSA
122042132 5273 Angiosperm View MSA
121346708 5274 Embryophyte View MSA
123426253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.304        
cufflinks 1.993        
cufflinks 0.954       Low
cufflinks 1.932        
cufflinks 0.879       Low
cufflinks 1.93        

0 Strain