Gene : RUS1 A. thaliana TAIR10
Primary Identifier:  ? AT3G45890 Defline:  (1 of 1) PTHR12770:SF7 - PROTEIN ROOT UVB SENSITIVE 1
Genomic Order:  3572 Name:  ? AT3G45890
Secondary Identifier:  ? PAC:19662517
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45890 0.5kb upstream 0.5kb upstream 3131 true Chr3: 16871181-16874311 Arabidopsis thaliana
AT3G45890 0.5kb upstream 0.5kb upstream 500 false Chr3: 16871181-16871680 Arabidopsis thaliana
AT3G45890 0.5kb downstream 0.5kb downstream 3131 true Chr3: 16871681-16874811 Arabidopsis thaliana
AT3G45890 0.5kb downstream 0.5kb downstream 500 false Chr3: 16874312-16874811 Arabidopsis thaliana
AT3G45890 1.0kb upstream 1.0kb upstream 3631 true Chr3: 16870681-16874311 Arabidopsis thaliana
AT3G45890 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16870681-16871680 Arabidopsis thaliana
AT3G45890 1.0kb downstream 1.0kb downstream 3631 true Chr3: 16871681-16875311 Arabidopsis thaliana
AT3G45890 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16874312-16875311 Arabidopsis thaliana
AT3G45890 2.0kb upstream 2.0kb upstream 4631 true Chr3: 16869681-16874311 Arabidopsis thaliana
AT3G45890 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16869681-16871680 Arabidopsis thaliana
AT3G45890 2.0kb downstream 2.0kb downstream 4631 true Chr3: 16871681-16876311 Arabidopsis thaliana
AT3G45890 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16874312-16876311 Arabidopsis thaliana
AT3G45890 5.0kb upstream 5.0kb upstream 7631 true Chr3: 16866681-16874311 Arabidopsis thaliana
AT3G45890 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16866681-16871680 Arabidopsis thaliana
AT3G45890 5.0kb downstream 5.0kb downstream 7631 true Chr3: 16871681-16879311 Arabidopsis thaliana
AT3G45890 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16874312-16879311 Arabidopsis thaliana
AT3G45890 10.0kb upstream 10.0kb upstream 12631 true Chr3: 16861681-16874311 Arabidopsis thaliana
AT3G45890 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16861681-16871680 Arabidopsis thaliana
AT3G45890 10.0kb downstream 10.0kb downstream 12631 true Chr3: 16871681-16884311 Arabidopsis thaliana
AT3G45890 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16874312-16884311 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369685 5261 Brassicaceae View MSA
123833981 5264 Brassicales-Malvales View MSA
124321913 5266 SBM View MSA
124242610 5268 Malvidae View MSA
124066620 5270 Rosid View MSA
123747441 5271 Pentapetalae View MSA
122789848 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.353        
cufflinks 4.693        
cufflinks 3.553       Low
cufflinks 5.296       High
cufflinks 3.878        
cufflinks 4.212        

0 Strain