Gene : AT3G45930 A. thaliana TAIR10
Defline:  (1 of 8) K11254 - histone H4 (H4) Genomic Order:  3576
Name:  ? AT3G45930 Secondary Identifier:  ? PAC:19664534
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45930 0.5kb upstream 0.5kb upstream 1061 true Chr3: 16882816-16883876 Arabidopsis thaliana
AT3G45930 0.5kb upstream 0.5kb upstream 500 false Chr3: 16882816-16883315 Arabidopsis thaliana
AT3G45930 0.5kb downstream 0.5kb downstream 1061 true Chr3: 16883316-16884376 Arabidopsis thaliana
AT3G45930 0.5kb downstream 0.5kb downstream 500 false Chr3: 16883877-16884376 Arabidopsis thaliana
AT3G45930 1.0kb upstream 1.0kb upstream 1561 true Chr3: 16882316-16883876 Arabidopsis thaliana
AT3G45930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16882316-16883315 Arabidopsis thaliana
AT3G45930 1.0kb downstream 1.0kb downstream 1561 true Chr3: 16883316-16884876 Arabidopsis thaliana
AT3G45930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16883877-16884876 Arabidopsis thaliana
AT3G45930 2.0kb upstream 2.0kb upstream 2561 true Chr3: 16881316-16883876 Arabidopsis thaliana
AT3G45930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16881316-16883315 Arabidopsis thaliana
AT3G45930 2.0kb downstream 2.0kb downstream 2561 true Chr3: 16883316-16885876 Arabidopsis thaliana
AT3G45930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16883877-16885876 Arabidopsis thaliana
AT3G45930 5.0kb upstream 5.0kb upstream 5561 true Chr3: 16878316-16883876 Arabidopsis thaliana
AT3G45930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16878316-16883315 Arabidopsis thaliana
AT3G45930 5.0kb downstream 5.0kb downstream 5561 true Chr3: 16883316-16888876 Arabidopsis thaliana
AT3G45930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16883877-16888876 Arabidopsis thaliana
AT3G45930 10.0kb upstream 10.0kb upstream 10561 true Chr3: 16873316-16883876 Arabidopsis thaliana
AT3G45930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16873316-16883315 Arabidopsis thaliana
AT3G45930 10.0kb downstream 10.0kb downstream 10561 true Chr3: 16883316-16893876 Arabidopsis thaliana
AT3G45930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16883877-16893876 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381681 5261 Brassicaceae View MSA
123841446 5264 Brassicales-Malvales View MSA
124349948 5266 SBM View MSA
124254537 5268 Malvidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.645     High  
cufflinks 36.745     High  
cufflinks 24.213        
cufflinks 37.086     High  
cufflinks 21.896       Low
cufflinks 55.114     High High

0 Strain