Gene : AT3G45940 A. thaliana TAIR10
Defline:  (1 of 2) 3.2.1.177//3.2.1.37//3.2.1.55 - Alpha-D-xyloside xylohydrolase / Alpha-xylosidase // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  3577
Name:  ? AT3G45940 Secondary Identifier:  ? PAC:19659409
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45940 0.5kb upstream 0.5kb upstream 3446 true Chr3: 16886226-16889671 Arabidopsis thaliana
AT3G45940 0.5kb upstream 0.5kb upstream 500 false Chr3: 16889172-16889671 Arabidopsis thaliana
AT3G45940 0.5kb downstream 0.5kb downstream 3446 true Chr3: 16885726-16889171 Arabidopsis thaliana
AT3G45940 0.5kb downstream 0.5kb downstream 500 false Chr3: 16885726-16886225 Arabidopsis thaliana
AT3G45940 1.0kb upstream 1.0kb upstream 3946 true Chr3: 16886226-16890171 Arabidopsis thaliana
AT3G45940 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16889172-16890171 Arabidopsis thaliana
AT3G45940 1.0kb downstream 1.0kb downstream 3946 true Chr3: 16885226-16889171 Arabidopsis thaliana
AT3G45940 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16885226-16886225 Arabidopsis thaliana
AT3G45940 2.0kb upstream 2.0kb upstream 4946 true Chr3: 16886226-16891171 Arabidopsis thaliana
AT3G45940 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16889172-16891171 Arabidopsis thaliana
AT3G45940 2.0kb downstream 2.0kb downstream 4946 true Chr3: 16884226-16889171 Arabidopsis thaliana
AT3G45940 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16884226-16886225 Arabidopsis thaliana
AT3G45940 5.0kb upstream 5.0kb upstream 7946 true Chr3: 16886226-16894171 Arabidopsis thaliana
AT3G45940 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16889172-16894171 Arabidopsis thaliana
AT3G45940 5.0kb downstream 5.0kb downstream 7946 true Chr3: 16881226-16889171 Arabidopsis thaliana
AT3G45940 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16881226-16886225 Arabidopsis thaliana
AT3G45940 10.0kb upstream 10.0kb upstream 12946 true Chr3: 16886226-16899171 Arabidopsis thaliana
AT3G45940 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16889172-16899171 Arabidopsis thaliana
AT3G45940 10.0kb downstream 10.0kb downstream 12946 true Chr3: 16876226-16889171 Arabidopsis thaliana
AT3G45940 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16876226-16886225 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329754 5261 Brassicaceae Singleton cluster - no MSA
123841894 5264 Brassicales-Malvales View MSA
124323103 5266 SBM View MSA
124248130 5268 Malvidae View MSA
123952226 5270 Rosid View MSA
123530087 5271 Pentapetalae View MSA
122565063 5272 Eudicot View MSA
122047765 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.935        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.798        
cufflinks 0.016     Low Low

0 Strain