Gene : AT3G54310 A. thaliana TAIR10
Genomic Order:  4470 Name:  ? AT3G54310
Secondary Identifier:  ? PAC:19661178
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54310 0.5kb upstream 0.5kb upstream 2292 true Chr3: 20111153-20113444 Arabidopsis thaliana
AT3G54310 0.5kb upstream 0.5kb upstream 500 false Chr3: 20112945-20113444 Arabidopsis thaliana
AT3G54310 0.5kb downstream 0.5kb downstream 2292 true Chr3: 20110653-20112944 Arabidopsis thaliana
AT3G54310 0.5kb downstream 0.5kb downstream 500 false Chr3: 20110653-20111152 Arabidopsis thaliana
AT3G54310 1.0kb upstream 1.0kb upstream 2792 true Chr3: 20111153-20113944 Arabidopsis thaliana
AT3G54310 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20112945-20113944 Arabidopsis thaliana
AT3G54310 1.0kb downstream 1.0kb downstream 2792 true Chr3: 20110153-20112944 Arabidopsis thaliana
AT3G54310 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20110153-20111152 Arabidopsis thaliana
AT3G54310 2.0kb upstream 2.0kb upstream 3792 true Chr3: 20111153-20114944 Arabidopsis thaliana
AT3G54310 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20112945-20114944 Arabidopsis thaliana
AT3G54310 2.0kb downstream 2.0kb downstream 3792 true Chr3: 20109153-20112944 Arabidopsis thaliana
AT3G54310 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20109153-20111152 Arabidopsis thaliana
AT3G54310 5.0kb upstream 5.0kb upstream 6792 true Chr3: 20111153-20117944 Arabidopsis thaliana
AT3G54310 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20112945-20117944 Arabidopsis thaliana
AT3G54310 5.0kb downstream 5.0kb downstream 6792 true Chr3: 20106153-20112944 Arabidopsis thaliana
AT3G54310 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20106153-20111152 Arabidopsis thaliana
AT3G54310 10.0kb upstream 10.0kb upstream 11792 true Chr3: 20111153-20122944 Arabidopsis thaliana
AT3G54310 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20112945-20122944 Arabidopsis thaliana
AT3G54310 10.0kb downstream 10.0kb downstream 11792 true Chr3: 20101153-20112944 Arabidopsis thaliana
AT3G54310 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20101153-20111152 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363975 5261 Brassicaceae View MSA
123837771 5264 Brassicales-Malvales View MSA
124342462 5266 SBM View MSA
124243987 5268 Malvidae View MSA
124068594 5270 Rosid View MSA
123748160 5271 Pentapetalae View MSA
122787709 5272 Eudicot View MSA
122045223 5273 Angiosperm View MSA
121310420 5274 Embryophyte View MSA
123347908 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.826        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.089        
cufflinks 0.015     Low Low
cufflinks 2.209        

0 Strain