Gene : FIP37 A. thaliana TAIR10
Primary Identifier:  ? AT3G54170 Defline:  (1 of 1) PTHR15217//PTHR15217:SF0 - WILMS' TUMOR 1-ASSOCIATING PROTEIN // PRE-MRNA-SPLICING REGULATOR WTAP
Genomic Order:  4456 Name:  ? AT3G54170
Secondary Identifier:  ? PAC:19660369
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54170 0.5kb upstream 0.5kb upstream 3318 true Chr3: 20056205-20059522 Arabidopsis thaliana
AT3G54170 0.5kb upstream 0.5kb upstream 500 false Chr3: 20056205-20056704 Arabidopsis thaliana
AT3G54170 0.5kb downstream 0.5kb downstream 3318 true Chr3: 20056705-20060022 Arabidopsis thaliana
AT3G54170 0.5kb downstream 0.5kb downstream 500 false Chr3: 20059523-20060022 Arabidopsis thaliana
AT3G54170 1.0kb upstream 1.0kb upstream 3818 true Chr3: 20055705-20059522 Arabidopsis thaliana
AT3G54170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20055705-20056704 Arabidopsis thaliana
AT3G54170 1.0kb downstream 1.0kb downstream 3818 true Chr3: 20056705-20060522 Arabidopsis thaliana
AT3G54170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20059523-20060522 Arabidopsis thaliana
AT3G54170 2.0kb upstream 2.0kb upstream 4818 true Chr3: 20054705-20059522 Arabidopsis thaliana
AT3G54170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20054705-20056704 Arabidopsis thaliana
AT3G54170 2.0kb downstream 2.0kb downstream 4818 true Chr3: 20056705-20061522 Arabidopsis thaliana
AT3G54170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20059523-20061522 Arabidopsis thaliana
AT3G54170 5.0kb upstream 5.0kb upstream 7818 true Chr3: 20051705-20059522 Arabidopsis thaliana
AT3G54170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20051705-20056704 Arabidopsis thaliana
AT3G54170 5.0kb downstream 5.0kb downstream 7818 true Chr3: 20056705-20064522 Arabidopsis thaliana
AT3G54170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20059523-20064522 Arabidopsis thaliana
AT3G54170 10.0kb upstream 10.0kb upstream 12818 true Chr3: 20046705-20059522 Arabidopsis thaliana
AT3G54170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20046705-20056704 Arabidopsis thaliana
AT3G54170 10.0kb downstream 10.0kb downstream 12818 true Chr3: 20056705-20069522 Arabidopsis thaliana
AT3G54170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20059523-20069522 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380254 5261 Brassicaceae View MSA
123832646 5264 Brassicales-Malvales View MSA
124336474 5266 SBM View MSA
124244299 5268 Malvidae View MSA
124060684 5270 Rosid View MSA
123743181 5271 Pentapetalae View MSA
122795045 5272 Eudicot View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.828        
cufflinks 8.651        
cufflinks 6.218       Low
cufflinks 8.76        
cufflinks 6.136       Low
cufflinks 8.848        

0 Strain