Gene : AT3G53810 A. thaliana TAIR10
Defline:  (1 of 12) PTHR27007//PTHR27007:SF13 - FAMILY NOT NAMED // L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-RELATED Genomic Order:  4419
Name:  ? AT3G53810 Secondary Identifier:  ? PAC:19663032
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53810 0.5kb upstream 0.5kb upstream 2743 true Chr3: 19932992-19935734 Arabidopsis thaliana
AT3G53810 0.5kb upstream 0.5kb upstream 500 false Chr3: 19935235-19935734 Arabidopsis thaliana
AT3G53810 0.5kb downstream 0.5kb downstream 2743 true Chr3: 19932492-19935234 Arabidopsis thaliana
AT3G53810 0.5kb downstream 0.5kb downstream 500 false Chr3: 19932492-19932991 Arabidopsis thaliana
AT3G53810 1.0kb upstream 1.0kb upstream 3243 true Chr3: 19932992-19936234 Arabidopsis thaliana
AT3G53810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19935235-19936234 Arabidopsis thaliana
AT3G53810 1.0kb downstream 1.0kb downstream 3243 true Chr3: 19931992-19935234 Arabidopsis thaliana
AT3G53810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19931992-19932991 Arabidopsis thaliana
AT3G53810 2.0kb upstream 2.0kb upstream 4243 true Chr3: 19932992-19937234 Arabidopsis thaliana
AT3G53810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19935235-19937234 Arabidopsis thaliana
AT3G53810 2.0kb downstream 2.0kb downstream 4243 true Chr3: 19930992-19935234 Arabidopsis thaliana
AT3G53810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19930992-19932991 Arabidopsis thaliana
AT3G53810 5.0kb upstream 5.0kb upstream 7243 true Chr3: 19932992-19940234 Arabidopsis thaliana
AT3G53810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19935235-19940234 Arabidopsis thaliana
AT3G53810 5.0kb downstream 5.0kb downstream 7243 true Chr3: 19927992-19935234 Arabidopsis thaliana
AT3G53810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19927992-19932991 Arabidopsis thaliana
AT3G53810 10.0kb upstream 10.0kb upstream 12243 true Chr3: 19932992-19945234 Arabidopsis thaliana
AT3G53810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19935235-19945234 Arabidopsis thaliana
AT3G53810 10.0kb downstream 10.0kb downstream 12243 true Chr3: 19922992-19935234 Arabidopsis thaliana
AT3G53810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19922992-19932991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371857 5261 Brassicaceae View MSA
123838621 5264 Brassicales-Malvales View MSA
124338313 5266 SBM View MSA
124238794 5268 Malvidae View MSA
124063814 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.502       High
cufflinks 7.933        
cufflinks 8.402        
cufflinks 7.869        
cufflinks 8.646        
cufflinks 6.976       Low

0 Strain