Gene : AT3G53730 A. thaliana TAIR10
Defline:  (1 of 8) K11254 - histone H4 (H4) Genomic Order:  4411
Name:  ? AT3G53730 Secondary Identifier:  ? PAC:19660038
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53730 0.5kb upstream 0.5kb upstream 1040 true Chr3: 19912494-19913533 Arabidopsis thaliana
AT3G53730 0.5kb upstream 0.5kb upstream 500 false Chr3: 19913034-19913533 Arabidopsis thaliana
AT3G53730 0.5kb downstream 0.5kb downstream 1040 true Chr3: 19911994-19913033 Arabidopsis thaliana
AT3G53730 0.5kb downstream 0.5kb downstream 500 false Chr3: 19911994-19912493 Arabidopsis thaliana
AT3G53730 1.0kb upstream 1.0kb upstream 1540 true Chr3: 19912494-19914033 Arabidopsis thaliana
AT3G53730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19913034-19914033 Arabidopsis thaliana
AT3G53730 1.0kb downstream 1.0kb downstream 1540 true Chr3: 19911494-19913033 Arabidopsis thaliana
AT3G53730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19911494-19912493 Arabidopsis thaliana
AT3G53730 2.0kb upstream 2.0kb upstream 2540 true Chr3: 19912494-19915033 Arabidopsis thaliana
AT3G53730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19913034-19915033 Arabidopsis thaliana
AT3G53730 2.0kb downstream 2.0kb downstream 2540 true Chr3: 19910494-19913033 Arabidopsis thaliana
AT3G53730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19910494-19912493 Arabidopsis thaliana
AT3G53730 5.0kb upstream 5.0kb upstream 5540 true Chr3: 19912494-19918033 Arabidopsis thaliana
AT3G53730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19913034-19918033 Arabidopsis thaliana
AT3G53730 5.0kb downstream 5.0kb downstream 5540 true Chr3: 19907494-19913033 Arabidopsis thaliana
AT3G53730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19907494-19912493 Arabidopsis thaliana
AT3G53730 10.0kb upstream 10.0kb upstream 10540 true Chr3: 19912494-19923033 Arabidopsis thaliana
AT3G53730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19913034-19923033 Arabidopsis thaliana
AT3G53730 10.0kb downstream 10.0kb downstream 10540 true Chr3: 19902494-19913033 Arabidopsis thaliana
AT3G53730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19902494-19912493 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381681 5261 Brassicaceae View MSA
123841446 5264 Brassicales-Malvales View MSA
124349948 5266 SBM View MSA
124254537 5268 Malvidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.922     High High
cufflinks 54.981     High  
cufflinks 50.123     High  
cufflinks 59.54     High  
cufflinks 39.544     High Low
cufflinks 74.828     High High

0 Strain