Gene : FC1 A. thaliana TAIR10
Primary Identifier:  ? AT3G53570 Defline:  (1 of 3) K08287 - dual-specificity kinase (E2.7.12.1)
Genomic Order:  4394 Name:  ? AT3G53570
Secondary Identifier:  ? PAC:19664260
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53570 0.5kb upstream 0.5kb upstream 3910 true Chr3: 19861179-19865088 Arabidopsis thaliana
AT3G53570 0.5kb upstream 0.5kb upstream 500 false Chr3: 19864589-19865088 Arabidopsis thaliana
AT3G53570 0.5kb downstream 0.5kb downstream 3910 true Chr3: 19860679-19864588 Arabidopsis thaliana
AT3G53570 0.5kb downstream 0.5kb downstream 500 false Chr3: 19860679-19861178 Arabidopsis thaliana
AT3G53570 1.0kb upstream 1.0kb upstream 4410 true Chr3: 19861179-19865588 Arabidopsis thaliana
AT3G53570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19864589-19865588 Arabidopsis thaliana
AT3G53570 1.0kb downstream 1.0kb downstream 4410 true Chr3: 19860179-19864588 Arabidopsis thaliana
AT3G53570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19860179-19861178 Arabidopsis thaliana
AT3G53570 2.0kb upstream 2.0kb upstream 5410 true Chr3: 19861179-19866588 Arabidopsis thaliana
AT3G53570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19864589-19866588 Arabidopsis thaliana
AT3G53570 2.0kb downstream 2.0kb downstream 5410 true Chr3: 19859179-19864588 Arabidopsis thaliana
AT3G53570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19859179-19861178 Arabidopsis thaliana
AT3G53570 5.0kb upstream 5.0kb upstream 8410 true Chr3: 19861179-19869588 Arabidopsis thaliana
AT3G53570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19864589-19869588 Arabidopsis thaliana
AT3G53570 5.0kb downstream 5.0kb downstream 8410 true Chr3: 19856179-19864588 Arabidopsis thaliana
AT3G53570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19856179-19861178 Arabidopsis thaliana
AT3G53570 10.0kb upstream 10.0kb upstream 13410 true Chr3: 19861179-19874588 Arabidopsis thaliana
AT3G53570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19864589-19874588 Arabidopsis thaliana
AT3G53570 10.0kb downstream 10.0kb downstream 13410 true Chr3: 19851179-19864588 Arabidopsis thaliana
AT3G53570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19851179-19861178 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365519 5261 Brassicaceae View MSA
123831805 5264 Brassicales-Malvales View MSA
124339375 5266 SBM View MSA
124250693 5268 Malvidae View MSA
124063543 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41       Low
cufflinks 2.184       High
cufflinks 1.571        
cufflinks 2.387       High
cufflinks 1.543        
cufflinks 1.715        

0 Strain