Gene : AT3G52950 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13780:SF48 - CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB1-RELATED Genomic Order:  4324
Name:  ? AT3G52950 Secondary Identifier:  ? PAC:19658555
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52950 0.5kb upstream 0.5kb upstream 2910 true Chr3: 19633910-19636819 Arabidopsis thaliana
AT3G52950 0.5kb upstream 0.5kb upstream 500 false Chr3: 19633910-19634409 Arabidopsis thaliana
AT3G52950 0.5kb downstream 0.5kb downstream 2910 true Chr3: 19634410-19637319 Arabidopsis thaliana
AT3G52950 0.5kb downstream 0.5kb downstream 500 false Chr3: 19636820-19637319 Arabidopsis thaliana
AT3G52950 1.0kb upstream 1.0kb upstream 3410 true Chr3: 19633410-19636819 Arabidopsis thaliana
AT3G52950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19633410-19634409 Arabidopsis thaliana
AT3G52950 1.0kb downstream 1.0kb downstream 3410 true Chr3: 19634410-19637819 Arabidopsis thaliana
AT3G52950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19636820-19637819 Arabidopsis thaliana
AT3G52950 2.0kb upstream 2.0kb upstream 4410 true Chr3: 19632410-19636819 Arabidopsis thaliana
AT3G52950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19632410-19634409 Arabidopsis thaliana
AT3G52950 2.0kb downstream 2.0kb downstream 4410 true Chr3: 19634410-19638819 Arabidopsis thaliana
AT3G52950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19636820-19638819 Arabidopsis thaliana
AT3G52950 5.0kb upstream 5.0kb upstream 7410 true Chr3: 19629410-19636819 Arabidopsis thaliana
AT3G52950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19629410-19634409 Arabidopsis thaliana
AT3G52950 5.0kb downstream 5.0kb downstream 7410 true Chr3: 19634410-19641819 Arabidopsis thaliana
AT3G52950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19636820-19641819 Arabidopsis thaliana
AT3G52950 10.0kb upstream 10.0kb upstream 12410 true Chr3: 19624410-19636819 Arabidopsis thaliana
AT3G52950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19624410-19634409 Arabidopsis thaliana
AT3G52950 10.0kb downstream 10.0kb downstream 12410 true Chr3: 19634410-19646819 Arabidopsis thaliana
AT3G52950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19636820-19646819 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369649 5261 Brassicaceae View MSA
123830121 5264 Brassicales-Malvales View MSA
124341181 5266 SBM View MSA
124242226 5268 Malvidae View MSA
124064778 5270 Rosid View MSA
123740951 5271 Pentapetalae View MSA
122789114 5272 Eudicot View MSA
122046020 5273 Angiosperm View MSA
121349998 5274 Embryophyte View MSA
123381535 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.919        
cufflinks 4.34        
cufflinks 3.093       Low
cufflinks 4.708        
cufflinks 2.881       Low
cufflinks 4.543        

0 Strain