Gene : FK A. thaliana TAIR10
Primary Identifier:  ? AT3G52940 Defline:  (1 of 1) 1.3.1.70 - Delta(14)-sterol reductase / Sterol C14-reductase
Genomic Order:  4322 Name:  ? AT3G52940
Secondary Identifier:  ? PAC:19660887
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2541 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52940 0.5kb upstream 0.5kb upstream 3599 true Chr3: 19630198-19633796 Arabidopsis thaliana
AT3G52940 0.5kb upstream 0.5kb upstream 500 false Chr3: 19633297-19633796 Arabidopsis thaliana
AT3G52940 0.5kb downstream 0.5kb downstream 3599 true Chr3: 19629698-19633296 Arabidopsis thaliana
AT3G52940 0.5kb downstream 0.5kb downstream 500 false Chr3: 19629698-19630197 Arabidopsis thaliana
AT3G52940 1.0kb upstream 1.0kb upstream 4099 true Chr3: 19630198-19634296 Arabidopsis thaliana
AT3G52940 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19633297-19634296 Arabidopsis thaliana
AT3G52940 1.0kb downstream 1.0kb downstream 4099 true Chr3: 19629198-19633296 Arabidopsis thaliana
AT3G52940 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19629198-19630197 Arabidopsis thaliana
AT3G52940 2.0kb upstream 2.0kb upstream 5099 true Chr3: 19630198-19635296 Arabidopsis thaliana
AT3G52940 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19633297-19635296 Arabidopsis thaliana
AT3G52940 2.0kb downstream 2.0kb downstream 5099 true Chr3: 19628198-19633296 Arabidopsis thaliana
AT3G52940 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19628198-19630197 Arabidopsis thaliana
AT3G52940 5.0kb upstream 5.0kb upstream 8099 true Chr3: 19630198-19638296 Arabidopsis thaliana
AT3G52940 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19633297-19638296 Arabidopsis thaliana
AT3G52940 5.0kb downstream 5.0kb downstream 8099 true Chr3: 19625198-19633296 Arabidopsis thaliana
AT3G52940 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19625198-19630197 Arabidopsis thaliana
AT3G52940 10.0kb upstream 10.0kb upstream 13099 true Chr3: 19630198-19643296 Arabidopsis thaliana
AT3G52940 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19633297-19643296 Arabidopsis thaliana
AT3G52940 10.0kb downstream 10.0kb downstream 13099 true Chr3: 19620198-19633296 Arabidopsis thaliana
AT3G52940 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19620198-19630197 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360509 5261 Brassicaceae View MSA
123833279 5264 Brassicales-Malvales View MSA
124344408 5266 SBM View MSA
124250977 5268 Malvidae View MSA
124062943 5270 Rosid View MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.688        
cufflinks 3.875        
cufflinks 2.135        
cufflinks 4.274        
cufflinks 1.957       Low
cufflinks 5.173       High

0 Strain