Gene : AT3G53430 A. thaliana TAIR10
Defline:  (1 of 3) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  4380
Name:  ? AT3G53430 Secondary Identifier:  ? PAC:19660576
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53430 0.5kb upstream 0.5kb upstream 1283 true Chr3: 19809687-19810969 Arabidopsis thaliana
AT3G53430 0.5kb upstream 0.5kb upstream 500 false Chr3: 19810470-19810969 Arabidopsis thaliana
AT3G53430 0.5kb downstream 0.5kb downstream 1283 true Chr3: 19809187-19810469 Arabidopsis thaliana
AT3G53430 0.5kb downstream 0.5kb downstream 500 false Chr3: 19809187-19809686 Arabidopsis thaliana
AT3G53430 1.0kb upstream 1.0kb upstream 1783 true Chr3: 19809687-19811469 Arabidopsis thaliana
AT3G53430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19810470-19811469 Arabidopsis thaliana
AT3G53430 1.0kb downstream 1.0kb downstream 1783 true Chr3: 19808687-19810469 Arabidopsis thaliana
AT3G53430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19808687-19809686 Arabidopsis thaliana
AT3G53430 2.0kb upstream 2.0kb upstream 2783 true Chr3: 19809687-19812469 Arabidopsis thaliana
AT3G53430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19810470-19812469 Arabidopsis thaliana
AT3G53430 2.0kb downstream 2.0kb downstream 2783 true Chr3: 19807687-19810469 Arabidopsis thaliana
AT3G53430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19807687-19809686 Arabidopsis thaliana
AT3G53430 5.0kb upstream 5.0kb upstream 5783 true Chr3: 19809687-19815469 Arabidopsis thaliana
AT3G53430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19810470-19815469 Arabidopsis thaliana
AT3G53430 5.0kb downstream 5.0kb downstream 5783 true Chr3: 19804687-19810469 Arabidopsis thaliana
AT3G53430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19804687-19809686 Arabidopsis thaliana
AT3G53430 10.0kb upstream 10.0kb upstream 10783 true Chr3: 19809687-19820469 Arabidopsis thaliana
AT3G53430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19810470-19820469 Arabidopsis thaliana
AT3G53430 10.0kb downstream 10.0kb downstream 10783 true Chr3: 19799687-19810469 Arabidopsis thaliana
AT3G53430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19799687-19809686 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378624 5261 Brassicaceae View MSA
123830752 5264 Brassicales-Malvales View MSA
124350930 5266 SBM View MSA
124254626 5268 Malvidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 231.181     High  
cufflinks 284.312     High  
cufflinks 205.888     High  
cufflinks 278.901     High  
cufflinks 161.911     High Low
cufflinks 330.589     High High

0 Strain