Gene : AT3G53010 A. thaliana TAIR10
Defline:  (1 of 2) PF03629 - Domain of unknown function (DUF303) (DUF303) Genomic Order:  4330
Name:  ? AT3G53010 Secondary Identifier:  ? PAC:19660703
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53010 0.5kb upstream 0.5kb upstream 2016 true Chr3: 19656488-19658503 Arabidopsis thaliana
AT3G53010 0.5kb upstream 0.5kb upstream 500 false Chr3: 19658004-19658503 Arabidopsis thaliana
AT3G53010 0.5kb downstream 0.5kb downstream 2016 true Chr3: 19655988-19658003 Arabidopsis thaliana
AT3G53010 0.5kb downstream 0.5kb downstream 500 false Chr3: 19655988-19656487 Arabidopsis thaliana
AT3G53010 1.0kb upstream 1.0kb upstream 2516 true Chr3: 19656488-19659003 Arabidopsis thaliana
AT3G53010 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19658004-19659003 Arabidopsis thaliana
AT3G53010 1.0kb downstream 1.0kb downstream 2516 true Chr3: 19655488-19658003 Arabidopsis thaliana
AT3G53010 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19655488-19656487 Arabidopsis thaliana
AT3G53010 2.0kb upstream 2.0kb upstream 3516 true Chr3: 19656488-19660003 Arabidopsis thaliana
AT3G53010 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19658004-19660003 Arabidopsis thaliana
AT3G53010 2.0kb downstream 2.0kb downstream 3516 true Chr3: 19654488-19658003 Arabidopsis thaliana
AT3G53010 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19654488-19656487 Arabidopsis thaliana
AT3G53010 5.0kb upstream 5.0kb upstream 6516 true Chr3: 19656488-19663003 Arabidopsis thaliana
AT3G53010 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19658004-19663003 Arabidopsis thaliana
AT3G53010 5.0kb downstream 5.0kb downstream 6516 true Chr3: 19651488-19658003 Arabidopsis thaliana
AT3G53010 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19651488-19656487 Arabidopsis thaliana
AT3G53010 10.0kb upstream 10.0kb upstream 11516 true Chr3: 19656488-19668003 Arabidopsis thaliana
AT3G53010 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19658004-19668003 Arabidopsis thaliana
AT3G53010 10.0kb downstream 10.0kb downstream 11516 true Chr3: 19646488-19658003 Arabidopsis thaliana
AT3G53010 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19646488-19656487 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373801 5261 Brassicaceae View MSA
123835899 5264 Brassicales-Malvales View MSA
124350168 5266 SBM View MSA
124239181 5268 Malvidae View MSA
124068070 5270 Rosid View MSA
123745944 5271 Pentapetalae View MSA
122795880 5272 Eudicot View MSA
122051207 5273 Angiosperm View MSA
121345875 5274 Embryophyte View MSA
123426857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.072        
cufflinks 0.986        
cufflinks 0.696        
cufflinks 1.426        
cufflinks 0.436       Low
cufflinks 2.146       High

0 Strain