Gene : AT3G52670 A. thaliana TAIR10
Defline:  (1 of 68) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  4294
Name:  ? AT3G52670 Secondary Identifier:  ? PAC:19661106
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52670 0.5kb upstream 0.5kb upstream 1991 true Chr3: 19524747-19526737 Arabidopsis thaliana
AT3G52670 0.5kb upstream 0.5kb upstream 500 false Chr3: 19524747-19525246 Arabidopsis thaliana
AT3G52670 0.5kb downstream 0.5kb downstream 1991 true Chr3: 19525247-19527237 Arabidopsis thaliana
AT3G52670 0.5kb downstream 0.5kb downstream 500 false Chr3: 19526738-19527237 Arabidopsis thaliana
AT3G52670 1.0kb upstream 1.0kb upstream 2491 true Chr3: 19524247-19526737 Arabidopsis thaliana
AT3G52670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19524247-19525246 Arabidopsis thaliana
AT3G52670 1.0kb downstream 1.0kb downstream 2491 true Chr3: 19525247-19527737 Arabidopsis thaliana
AT3G52670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19526738-19527737 Arabidopsis thaliana
AT3G52670 2.0kb upstream 2.0kb upstream 3491 true Chr3: 19523247-19526737 Arabidopsis thaliana
AT3G52670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19523247-19525246 Arabidopsis thaliana
AT3G52670 2.0kb downstream 2.0kb downstream 3491 true Chr3: 19525247-19528737 Arabidopsis thaliana
AT3G52670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19526738-19528737 Arabidopsis thaliana
AT3G52670 5.0kb upstream 5.0kb upstream 6491 true Chr3: 19520247-19526737 Arabidopsis thaliana
AT3G52670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19520247-19525246 Arabidopsis thaliana
AT3G52670 5.0kb downstream 5.0kb downstream 6491 true Chr3: 19525247-19531737 Arabidopsis thaliana
AT3G52670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19526738-19531737 Arabidopsis thaliana
AT3G52670 10.0kb upstream 10.0kb upstream 11491 true Chr3: 19515247-19526737 Arabidopsis thaliana
AT3G52670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19515247-19525246 Arabidopsis thaliana
AT3G52670 10.0kb downstream 10.0kb downstream 11491 true Chr3: 19525247-19536737 Arabidopsis thaliana
AT3G52670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19526738-19536737 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378245 5261 Brassicaceae View MSA
123801800 5264 Brassicales-Malvales View MSA
124299060 5266 SBM View MSA
124150566 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.007       High
cufflinks 1.717        
cufflinks 1.706        
cufflinks 1.758        
cufflinks 1.895        
cufflinks 1.394       Low

0 Strain