Gene : OFP6 A. thaliana TAIR10
Primary Identifier:  ? AT3G52525 Defline:  (1 of 2) PTHR33057//PTHR33057:SF17 - FAMILY NOT NAMED // GB|AAD12216.1-RELATED
Genomic Order:  4279 Name:  ? AT3G52525
Secondary Identifier:  ? PAC:19664887
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52525 0.5kb upstream 0.5kb upstream 1303 true Chr3: 19474659-19475961 Arabidopsis thaliana
AT3G52525 0.5kb upstream 0.5kb upstream 500 false Chr3: 19474659-19475158 Arabidopsis thaliana
AT3G52525 0.5kb downstream 0.5kb downstream 1303 true Chr3: 19475159-19476461 Arabidopsis thaliana
AT3G52525 0.5kb downstream 0.5kb downstream 500 false Chr3: 19475962-19476461 Arabidopsis thaliana
AT3G52525 1.0kb upstream 1.0kb upstream 1803 true Chr3: 19474159-19475961 Arabidopsis thaliana
AT3G52525 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19474159-19475158 Arabidopsis thaliana
AT3G52525 1.0kb downstream 1.0kb downstream 1803 true Chr3: 19475159-19476961 Arabidopsis thaliana
AT3G52525 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19475962-19476961 Arabidopsis thaliana
AT3G52525 2.0kb upstream 2.0kb upstream 2803 true Chr3: 19473159-19475961 Arabidopsis thaliana
AT3G52525 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19473159-19475158 Arabidopsis thaliana
AT3G52525 2.0kb downstream 2.0kb downstream 2803 true Chr3: 19475159-19477961 Arabidopsis thaliana
AT3G52525 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19475962-19477961 Arabidopsis thaliana
AT3G52525 5.0kb upstream 5.0kb upstream 5803 true Chr3: 19470159-19475961 Arabidopsis thaliana
AT3G52525 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19470159-19475158 Arabidopsis thaliana
AT3G52525 5.0kb downstream 5.0kb downstream 5803 true Chr3: 19475159-19480961 Arabidopsis thaliana
AT3G52525 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19475962-19480961 Arabidopsis thaliana
AT3G52525 10.0kb upstream 10.0kb upstream 10803 true Chr3: 19465159-19475961 Arabidopsis thaliana
AT3G52525 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19465159-19475158 Arabidopsis thaliana
AT3G52525 10.0kb downstream 10.0kb downstream 10803 true Chr3: 19475159-19485961 Arabidopsis thaliana
AT3G52525 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19475962-19485961 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343201 5261 Brassicaceae View MSA
123783471 5264 Brassicales-Malvales View MSA
124281703 5266 SBM View MSA
124136415 5268 Malvidae View MSA
123864280 5270 Rosid View MSA
123449605 5271 Pentapetalae View MSA
122485136 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.067       High
cufflinks 0.34     Low Low
cufflinks 0.63        
cufflinks 0.355     Low  
cufflinks 0.735        
cufflinks 0.414        

0 Strain