Gene : AT3G57490 A. thaliana TAIR10
Defline:  (1 of 6) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2) Genomic Order:  4803
Name:  ? AT3G57490 Secondary Identifier:  ? PAC:19658708
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57490 0.5kb upstream 0.5kb upstream 1783 true Chr3: 21279666-21281448 Arabidopsis thaliana
AT3G57490 0.5kb upstream 0.5kb upstream 500 false Chr3: 21280949-21281448 Arabidopsis thaliana
AT3G57490 0.5kb downstream 0.5kb downstream 1783 true Chr3: 21279166-21280948 Arabidopsis thaliana
AT3G57490 0.5kb downstream 0.5kb downstream 500 false Chr3: 21279166-21279665 Arabidopsis thaliana
AT3G57490 1.0kb upstream 1.0kb upstream 2283 true Chr3: 21279666-21281948 Arabidopsis thaliana
AT3G57490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21280949-21281948 Arabidopsis thaliana
AT3G57490 1.0kb downstream 1.0kb downstream 2283 true Chr3: 21278666-21280948 Arabidopsis thaliana
AT3G57490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21278666-21279665 Arabidopsis thaliana
AT3G57490 2.0kb upstream 2.0kb upstream 3283 true Chr3: 21279666-21282948 Arabidopsis thaliana
AT3G57490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21280949-21282948 Arabidopsis thaliana
AT3G57490 2.0kb downstream 2.0kb downstream 3283 true Chr3: 21277666-21280948 Arabidopsis thaliana
AT3G57490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21277666-21279665 Arabidopsis thaliana
AT3G57490 5.0kb upstream 5.0kb upstream 6283 true Chr3: 21279666-21285948 Arabidopsis thaliana
AT3G57490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21280949-21285948 Arabidopsis thaliana
AT3G57490 5.0kb downstream 5.0kb downstream 6283 true Chr3: 21274666-21280948 Arabidopsis thaliana
AT3G57490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21274666-21279665 Arabidopsis thaliana
AT3G57490 10.0kb upstream 10.0kb upstream 11283 true Chr3: 21279666-21290948 Arabidopsis thaliana
AT3G57490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21280949-21290948 Arabidopsis thaliana
AT3G57490 10.0kb downstream 10.0kb downstream 11283 true Chr3: 21269666-21280948 Arabidopsis thaliana
AT3G57490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21269666-21279665 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380805 5261 Brassicaceae View MSA
123836722 5264 Brassicales-Malvales View MSA
124337985 5266 SBM View MSA
124250272 5268 Malvidae View MSA
124064962 5270 Rosid View MSA
123747493 5271 Pentapetalae View MSA
122787433 5272 Eudicot View MSA
122047189 5273 Angiosperm View MSA
121344542 5274 Embryophyte View MSA
123424194 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.916        
cufflinks 17.546        
cufflinks 10.514        
cufflinks 21.148        
cufflinks 9.46       Low
cufflinks 25.258       High

0 Strain