Gene : GTE6 A. thaliana TAIR10
Primary Identifier:  ? AT3G52280 Defline:  (1 of 2) PTHR22880//PTHR22880:SF163 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // TRANSCRIPTION FACTOR GTE1
Genomic Order:  4254 Name:  ? AT3G52280
Secondary Identifier:  ? PAC:19661899
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52280 0.5kb upstream 0.5kb upstream 2837 true Chr3: 19389047-19391883 Arabidopsis thaliana
AT3G52280 0.5kb upstream 0.5kb upstream 500 false Chr3: 19391384-19391883 Arabidopsis thaliana
AT3G52280 0.5kb downstream 0.5kb downstream 2837 true Chr3: 19388547-19391383 Arabidopsis thaliana
AT3G52280 0.5kb downstream 0.5kb downstream 500 false Chr3: 19388547-19389046 Arabidopsis thaliana
AT3G52280 1.0kb upstream 1.0kb upstream 3337 true Chr3: 19389047-19392383 Arabidopsis thaliana
AT3G52280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19391384-19392383 Arabidopsis thaliana
AT3G52280 1.0kb downstream 1.0kb downstream 3337 true Chr3: 19388047-19391383 Arabidopsis thaliana
AT3G52280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19388047-19389046 Arabidopsis thaliana
AT3G52280 2.0kb upstream 2.0kb upstream 4337 true Chr3: 19389047-19393383 Arabidopsis thaliana
AT3G52280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19391384-19393383 Arabidopsis thaliana
AT3G52280 2.0kb downstream 2.0kb downstream 4337 true Chr3: 19387047-19391383 Arabidopsis thaliana
AT3G52280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19387047-19389046 Arabidopsis thaliana
AT3G52280 5.0kb upstream 5.0kb upstream 7337 true Chr3: 19389047-19396383 Arabidopsis thaliana
AT3G52280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19391384-19396383 Arabidopsis thaliana
AT3G52280 5.0kb downstream 5.0kb downstream 7337 true Chr3: 19384047-19391383 Arabidopsis thaliana
AT3G52280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19384047-19389046 Arabidopsis thaliana
AT3G52280 10.0kb upstream 10.0kb upstream 12337 true Chr3: 19389047-19401383 Arabidopsis thaliana
AT3G52280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19391384-19401383 Arabidopsis thaliana
AT3G52280 10.0kb downstream 10.0kb downstream 12337 true Chr3: 19379047-19391383 Arabidopsis thaliana
AT3G52280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19379047-19389046 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373989 5261 Brassicaceae View MSA
123828813 5264 Brassicales-Malvales View MSA
124347054 5266 SBM View MSA
124244594 5268 Malvidae View MSA
124066243 5270 Rosid View MSA
123745671 5271 Pentapetalae View MSA
122792234 5272 Eudicot View MSA
122042971 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121343970 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.481        
cufflinks 4.89        
cufflinks 3.3       Low
cufflinks 4.854        
cufflinks 3.699        
cufflinks 4.424        

0 Strain