Gene : LTA3 A. thaliana TAIR10
Primary Identifier:  ? AT3G52200 Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL
Genomic Order:  4246 Name:  ? AT3G52200
Secondary Identifier:  ? PAC:19664486
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52200 0.5kb upstream 0.5kb upstream 6682 true Chr3: 19359706-19366387 Arabidopsis thaliana
AT3G52200 0.5kb upstream 0.5kb upstream 500 false Chr3: 19359706-19360205 Arabidopsis thaliana
AT3G52200 0.5kb downstream 0.5kb downstream 6682 true Chr3: 19360206-19366887 Arabidopsis thaliana
AT3G52200 0.5kb downstream 0.5kb downstream 500 false Chr3: 19366388-19366887 Arabidopsis thaliana
AT3G52200 1.0kb upstream 1.0kb upstream 7182 true Chr3: 19359206-19366387 Arabidopsis thaliana
AT3G52200 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19359206-19360205 Arabidopsis thaliana
AT3G52200 1.0kb downstream 1.0kb downstream 7182 true Chr3: 19360206-19367387 Arabidopsis thaliana
AT3G52200 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19366388-19367387 Arabidopsis thaliana
AT3G52200 2.0kb upstream 2.0kb upstream 8182 true Chr3: 19358206-19366387 Arabidopsis thaliana
AT3G52200 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19358206-19360205 Arabidopsis thaliana
AT3G52200 2.0kb downstream 2.0kb downstream 8182 true Chr3: 19360206-19368387 Arabidopsis thaliana
AT3G52200 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19366388-19368387 Arabidopsis thaliana
AT3G52200 5.0kb upstream 5.0kb upstream 11182 true Chr3: 19355206-19366387 Arabidopsis thaliana
AT3G52200 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19355206-19360205 Arabidopsis thaliana
AT3G52200 5.0kb downstream 5.0kb downstream 11182 true Chr3: 19360206-19371387 Arabidopsis thaliana
AT3G52200 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19366388-19371387 Arabidopsis thaliana
AT3G52200 10.0kb upstream 10.0kb upstream 16182 true Chr3: 19350206-19366387 Arabidopsis thaliana
AT3G52200 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19350206-19360205 Arabidopsis thaliana
AT3G52200 10.0kb downstream 10.0kb downstream 16182 true Chr3: 19360206-19376387 Arabidopsis thaliana
AT3G52200 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19366388-19376387 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122330273 5261 Brassicaceae Singleton cluster - no MSA
123836955 5264 Brassicales-Malvales View MSA
124341796 5266 SBM View MSA
124242704 5268 Malvidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.706        
cufflinks 6.15        
cufflinks 3.933       Low
cufflinks 6.57        
cufflinks 4.094       Low
cufflinks 6.697       High

0 Strain