Gene : AT3G52110 A. thaliana TAIR10
Genomic Order:  4235 Name:  ? AT3G52110
Secondary Identifier:  ? PAC:19663173
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52110 0.5kb upstream 0.5kb upstream 2464 true Chr3: 19323750-19326213 Arabidopsis thaliana
AT3G52110 0.5kb upstream 0.5kb upstream 500 false Chr3: 19325714-19326213 Arabidopsis thaliana
AT3G52110 0.5kb downstream 0.5kb downstream 2464 true Chr3: 19323250-19325713 Arabidopsis thaliana
AT3G52110 0.5kb downstream 0.5kb downstream 500 false Chr3: 19323250-19323749 Arabidopsis thaliana
AT3G52110 1.0kb upstream 1.0kb upstream 2964 true Chr3: 19323750-19326713 Arabidopsis thaliana
AT3G52110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19325714-19326713 Arabidopsis thaliana
AT3G52110 1.0kb downstream 1.0kb downstream 2964 true Chr3: 19322750-19325713 Arabidopsis thaliana
AT3G52110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19322750-19323749 Arabidopsis thaliana
AT3G52110 2.0kb upstream 2.0kb upstream 3964 true Chr3: 19323750-19327713 Arabidopsis thaliana
AT3G52110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19325714-19327713 Arabidopsis thaliana
AT3G52110 2.0kb downstream 2.0kb downstream 3964 true Chr3: 19321750-19325713 Arabidopsis thaliana
AT3G52110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19321750-19323749 Arabidopsis thaliana
AT3G52110 5.0kb upstream 5.0kb upstream 6964 true Chr3: 19323750-19330713 Arabidopsis thaliana
AT3G52110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19325714-19330713 Arabidopsis thaliana
AT3G52110 5.0kb downstream 5.0kb downstream 6964 true Chr3: 19318750-19325713 Arabidopsis thaliana
AT3G52110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19318750-19323749 Arabidopsis thaliana
AT3G52110 10.0kb upstream 10.0kb upstream 11964 true Chr3: 19323750-19335713 Arabidopsis thaliana
AT3G52110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19325714-19335713 Arabidopsis thaliana
AT3G52110 10.0kb downstream 10.0kb downstream 11964 true Chr3: 19313750-19325713 Arabidopsis thaliana
AT3G52110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19313750-19323749 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362650 5261 Brassicaceae View MSA
123838868 5264 Brassicales-Malvales View MSA
124339911 5266 SBM View MSA
124237529 5268 Malvidae View MSA
124065228 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.495        
cufflinks 6.626        
cufflinks 1.253        
cufflinks 4.746        
cufflinks 0.817       Low
cufflinks 9.552       High

0 Strain