Gene : AT3G55320 A. thaliana TAIR10
Defline:  (1 of 21) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Genomic Order:  4576
Name:  ? AT3G55320 Secondary Identifier:  ? PAC:19664094
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55320 0.5kb upstream 0.5kb upstream 6902 true Chr3: 20506992-20513893 Arabidopsis thaliana
AT3G55320 0.5kb upstream 0.5kb upstream 500 false Chr3: 20513394-20513893 Arabidopsis thaliana
AT3G55320 0.5kb downstream 0.5kb downstream 6902 true Chr3: 20506492-20513393 Arabidopsis thaliana
AT3G55320 0.5kb downstream 0.5kb downstream 500 false Chr3: 20506492-20506991 Arabidopsis thaliana
AT3G55320 1.0kb upstream 1.0kb upstream 7402 true Chr3: 20506992-20514393 Arabidopsis thaliana
AT3G55320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20513394-20514393 Arabidopsis thaliana
AT3G55320 1.0kb downstream 1.0kb downstream 7402 true Chr3: 20505992-20513393 Arabidopsis thaliana
AT3G55320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20505992-20506991 Arabidopsis thaliana
AT3G55320 2.0kb upstream 2.0kb upstream 8402 true Chr3: 20506992-20515393 Arabidopsis thaliana
AT3G55320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20513394-20515393 Arabidopsis thaliana
AT3G55320 2.0kb downstream 2.0kb downstream 8402 true Chr3: 20504992-20513393 Arabidopsis thaliana
AT3G55320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20504992-20506991 Arabidopsis thaliana
AT3G55320 5.0kb upstream 5.0kb upstream 11402 true Chr3: 20506992-20518393 Arabidopsis thaliana
AT3G55320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20513394-20518393 Arabidopsis thaliana
AT3G55320 5.0kb downstream 5.0kb downstream 11402 true Chr3: 20501992-20513393 Arabidopsis thaliana
AT3G55320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20501992-20506991 Arabidopsis thaliana
AT3G55320 10.0kb upstream 10.0kb upstream 16402 true Chr3: 20506992-20523393 Arabidopsis thaliana
AT3G55320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20513394-20523393 Arabidopsis thaliana
AT3G55320 10.0kb downstream 10.0kb downstream 16402 true Chr3: 20496992-20513393 Arabidopsis thaliana
AT3G55320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20496992-20506991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372124 5261 Brassicaceae View MSA
123837411 5264 Brassicales-Malvales View MSA
124338738 5266 SBM View MSA
124239270 5268 Malvidae View MSA
124072501 5270 Rosid View MSA
123739831 5271 Pentapetalae View MSA
122793559 5272 Eudicot View MSA
122043671 5273 Angiosperm View MSA
121348090 5274 Embryophyte View MSA
123380726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.679        
cufflinks 5.017        
cufflinks 3.567       Low
cufflinks 5.015        
cufflinks 3.965        
cufflinks 5.994       High

0 Strain