Gene : AT3G51320 A. thaliana TAIR10
Defline:  (1 of 423) PF13041 - PPR repeat family (PPR_2) Genomic Order:  4149
Name:  ? AT3G51320 Secondary Identifier:  ? PAC:19664720
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51320 0.5kb upstream 0.5kb upstream 2464 true Chr3: 19049602-19052065 Arabidopsis thaliana
AT3G51320 0.5kb upstream 0.5kb upstream 500 false Chr3: 19051566-19052065 Arabidopsis thaliana
AT3G51320 0.5kb downstream 0.5kb downstream 2464 true Chr3: 19049102-19051565 Arabidopsis thaliana
AT3G51320 0.5kb downstream 0.5kb downstream 500 false Chr3: 19049102-19049601 Arabidopsis thaliana
AT3G51320 1.0kb upstream 1.0kb upstream 2964 true Chr3: 19049602-19052565 Arabidopsis thaliana
AT3G51320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19051566-19052565 Arabidopsis thaliana
AT3G51320 1.0kb downstream 1.0kb downstream 2964 true Chr3: 19048602-19051565 Arabidopsis thaliana
AT3G51320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19048602-19049601 Arabidopsis thaliana
AT3G51320 2.0kb upstream 2.0kb upstream 3964 true Chr3: 19049602-19053565 Arabidopsis thaliana
AT3G51320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19051566-19053565 Arabidopsis thaliana
AT3G51320 2.0kb downstream 2.0kb downstream 3964 true Chr3: 19047602-19051565 Arabidopsis thaliana
AT3G51320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19047602-19049601 Arabidopsis thaliana
AT3G51320 5.0kb upstream 5.0kb upstream 6964 true Chr3: 19049602-19056565 Arabidopsis thaliana
AT3G51320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19051566-19056565 Arabidopsis thaliana
AT3G51320 5.0kb downstream 5.0kb downstream 6964 true Chr3: 19044602-19051565 Arabidopsis thaliana
AT3G51320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19044602-19049601 Arabidopsis thaliana
AT3G51320 10.0kb upstream 10.0kb upstream 11964 true Chr3: 19049602-19061565 Arabidopsis thaliana
AT3G51320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19051566-19061565 Arabidopsis thaliana
AT3G51320 10.0kb downstream 10.0kb downstream 11964 true Chr3: 19039602-19051565 Arabidopsis thaliana
AT3G51320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19039602-19049601 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370330 5261 Brassicaceae View MSA
123835668 5264 Brassicales-Malvales View MSA
124339835 5266 SBM View MSA
124238427 5268 Malvidae View MSA
124051517 5270 Rosid View MSA
123741798 5271 Pentapetalae View MSA
122789514 5272 Eudicot View MSA
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.935        
cufflinks 3.938        
cufflinks 3.155       Low
cufflinks 4.139        
cufflinks 3.03       Low
cufflinks 4.292        

0 Strain