Gene : AT3G19090 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22792//PTHR22792:SF62 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6C Genomic Order:  1980
Name:  ? AT3G19090 Secondary Identifier:  ? PAC:19662856
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19090 0.5kb upstream 0.5kb upstream 2744 true Chr3: 6600966-6603709 Arabidopsis thaliana
AT3G19090 0.5kb upstream 0.5kb upstream 500 false Chr3: 6600966-6601465 Arabidopsis thaliana
AT3G19090 0.5kb downstream 0.5kb downstream 2744 true Chr3: 6601466-6604209 Arabidopsis thaliana
AT3G19090 0.5kb downstream 0.5kb downstream 500 false Chr3: 6603710-6604209 Arabidopsis thaliana
AT3G19090 1.0kb upstream 1.0kb upstream 3244 true Chr3: 6600466-6603709 Arabidopsis thaliana
AT3G19090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6600466-6601465 Arabidopsis thaliana
AT3G19090 1.0kb downstream 1.0kb downstream 3244 true Chr3: 6601466-6604709 Arabidopsis thaliana
AT3G19090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6603710-6604709 Arabidopsis thaliana
AT3G19090 2.0kb upstream 2.0kb upstream 4244 true Chr3: 6599466-6603709 Arabidopsis thaliana
AT3G19090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6599466-6601465 Arabidopsis thaliana
AT3G19090 2.0kb downstream 2.0kb downstream 4244 true Chr3: 6601466-6605709 Arabidopsis thaliana
AT3G19090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6603710-6605709 Arabidopsis thaliana
AT3G19090 5.0kb upstream 5.0kb upstream 7244 true Chr3: 6596466-6603709 Arabidopsis thaliana
AT3G19090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6596466-6601465 Arabidopsis thaliana
AT3G19090 5.0kb downstream 5.0kb downstream 7244 true Chr3: 6601466-6608709 Arabidopsis thaliana
AT3G19090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6603710-6608709 Arabidopsis thaliana
AT3G19090 10.0kb upstream 10.0kb upstream 12244 true Chr3: 6591466-6603709 Arabidopsis thaliana
AT3G19090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6591466-6601465 Arabidopsis thaliana
AT3G19090 10.0kb downstream 10.0kb downstream 12244 true Chr3: 6601466-6613709 Arabidopsis thaliana
AT3G19090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6603710-6613709 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374901 5261 Brassicaceae View MSA
123839749 5264 Brassicales-Malvales View MSA
124342465 5266 SBM View MSA
124254424 5268 Malvidae View MSA
124067915 5270 Rosid View MSA
123749419 5271 Pentapetalae View MSA
122785801 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.068     Low  
cufflinks 0.045     Low  
cufflinks 0.155     Low High
cufflinks 0.017     Low  
cufflinks 0.058     Low  

0 Strain